Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01333 and H281DRAFT_01334 are separated by 83 nucleotides H281DRAFT_01334 and H281DRAFT_01335 overlap by 31 nucleotides H281DRAFT_01335 and H281DRAFT_01336 are separated by 204 nucleotides
H281DRAFT_01333: H281DRAFT_01333 - pyrroloquinoline quinone biosynthesis protein E, at 173,257 to 174,459
_01333
H281DRAFT_01334: H281DRAFT_01334 - two component transcriptional regulator, LuxR family, at 174,543 to 175,205
_01334
H281DRAFT_01335: H281DRAFT_01335 - Signal transduction histidine kinase, at 175,175 to 176,197
_01335
H281DRAFT_01336: H281DRAFT_01336 - Outer membrane receptor proteins, mostly Fe transport, at 176,402 to 178,765
_01336
Position (kb) 175
176
177 Strain fitness (log2 ratio) -1
0
1 at 174.253 kb on + strand, within H281DRAFT_01333 at 174.254 kb on - strand, within H281DRAFT_01333 at 174.452 kb on - strand at 174.458 kb on - strand at 175.553 kb on + strand, within H281DRAFT_01335 at 175.554 kb on - strand, within H281DRAFT_01335 at 175.554 kb on - strand, within H281DRAFT_01335 at 175.797 kb on + strand, within H281DRAFT_01335 at 176.975 kb on + strand, within H281DRAFT_01336 at 176.976 kb on - strand, within H281DRAFT_01336 at 176.976 kb on - strand, within H281DRAFT_01336 at 177.125 kb on + strand, within H281DRAFT_01336 at 177.129 kb on - strand, within H281DRAFT_01336
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 174,253 + H281DRAFT_01333 0.83 -0.8 174,254 - H281DRAFT_01333 0.83 +0.1 174,452 - +0.4 174,458 - -0.2 175,553 + H281DRAFT_01335 0.37 -0.2 175,554 - H281DRAFT_01335 0.37 -0.2 175,554 - H281DRAFT_01335 0.37 -0.3 175,797 + H281DRAFT_01335 0.61 -1.7 176,975 + H281DRAFT_01336 0.24 -0.4 176,976 - H281DRAFT_01336 0.24 -0.3 176,976 - H281DRAFT_01336 0.24 +0.1 177,125 + H281DRAFT_01336 0.31 +0.4 177,129 - H281DRAFT_01336 0.31 -0.6
Or see this region's nucleotide sequence