Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01127 and H281DRAFT_01128 are separated by 6 nucleotides H281DRAFT_01128 and H281DRAFT_01129 are separated by 74 nucleotides H281DRAFT_01129 and H281DRAFT_01130 are separated by 133 nucleotides
H281DRAFT_01127: H281DRAFT_01127 - Molecular chaperone, at 1,269,560 to 1,272,529
_01127
H281DRAFT_01128: H281DRAFT_01128 - phosphonoacetaldehyde hydrolase, at 1,272,536 to 1,273,339
_01128
H281DRAFT_01129: H281DRAFT_01129 - 2-aminoethylphosphonate-pyruvate transaminase, at 1,273,414 to 1,274,664
_01129
H281DRAFT_01130: H281DRAFT_01130 - transcriptional regulator, LysR family, at 1,274,798 to 1,275,676
_01130
Position (kb)
1273
1274
1275 Strain fitness (log2 ratio)
-1
0
1 at 1272.846 kb on + strand, within H281DRAFT_01128 at 1272.855 kb on + strand, within H281DRAFT_01128 at 1272.855 kb on + strand, within H281DRAFT_01128 at 1272.855 kb on + strand, within H281DRAFT_01128 at 1272.856 kb on - strand, within H281DRAFT_01128 at 1272.856 kb on - strand, within H281DRAFT_01128 at 1273.043 kb on - strand at 1273.043 kb on - strand, within H281DRAFT_01128 at 1273.086 kb on + strand, within H281DRAFT_01128 at 1273.125 kb on + strand, within H281DRAFT_01128 at 1273.125 kb on + strand, within H281DRAFT_01128 at 1273.125 kb on + strand, within H281DRAFT_01128 at 1273.125 kb on + strand, within H281DRAFT_01128 at 1273.126 kb on - strand at 1273.126 kb on - strand, within H281DRAFT_01128 at 1273.126 kb on - strand, within H281DRAFT_01128 at 1273.233 kb on - strand, within H281DRAFT_01128 at 1273.287 kb on + strand at 1273.513 kb on + strand at 1273.595 kb on + strand, within H281DRAFT_01129 at 1273.596 kb on - strand, within H281DRAFT_01129 at 1273.840 kb on - strand, within H281DRAFT_01129 at 1274.179 kb on - strand, within H281DRAFT_01129 at 1274.376 kb on - strand, within H281DRAFT_01129 at 1274.559 kb on - strand at 1274.718 kb on + strand at 1274.763 kb on + strand at 1274.795 kb on + strand at 1274.795 kb on + strand at 1274.805 kb on - strand at 1275.007 kb on + strand, within H281DRAFT_01130 at 1275.007 kb on + strand at 1275.447 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,272,846 + H281DRAFT_01128 0.39 +0.9 1,272,855 + H281DRAFT_01128 0.40 -0.3 1,272,855 + H281DRAFT_01128 0.40 -0.3 1,272,855 + H281DRAFT_01128 0.40 +0.7 1,272,856 - H281DRAFT_01128 0.40 +0.0 1,272,856 - H281DRAFT_01128 0.40 +0.2 1,273,043 - +1.4 1,273,043 - H281DRAFT_01128 0.63 +0.8 1,273,086 + H281DRAFT_01128 0.68 +0.4 1,273,125 + H281DRAFT_01128 0.73 -0.0 1,273,125 + H281DRAFT_01128 0.73 +0.7 1,273,125 + H281DRAFT_01128 0.73 -0.5 1,273,125 + H281DRAFT_01128 0.73 -0.2 1,273,126 - -1.1 1,273,126 - H281DRAFT_01128 0.73 +0.1 1,273,126 - H281DRAFT_01128 0.73 +0.0 1,273,233 - H281DRAFT_01128 0.87 -0.2 1,273,287 + -0.3 1,273,513 + +0.5 1,273,595 + H281DRAFT_01129 0.14 +0.4 1,273,596 - H281DRAFT_01129 0.15 +1.2 1,273,840 - H281DRAFT_01129 0.34 -0.1 1,274,179 - H281DRAFT_01129 0.61 +0.6 1,274,376 - H281DRAFT_01129 0.77 +0.5 1,274,559 - +0.3 1,274,718 + +0.8 1,274,763 + +0.2 1,274,795 + +0.1 1,274,795 + -0.5 1,274,805 - -0.3 1,275,007 + H281DRAFT_01130 0.24 +1.2 1,275,007 + +0.9 1,275,447 - -0.7
Or see this region's nucleotide sequence