Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01015 and H281DRAFT_01016 are separated by 140 nucleotides H281DRAFT_01016 and H281DRAFT_01017 are separated by 76 nucleotides H281DRAFT_01017 and H281DRAFT_01018 are separated by 214 nucleotides
H281DRAFT_01015: H281DRAFT_01015 - uncharacterized peroxidase-related enzyme, at 1,140,236 to 1,140,781
_01015
H281DRAFT_01016: H281DRAFT_01016 - Nitroreductase, at 1,140,922 to 1,141,557
_01016
H281DRAFT_01017: H281DRAFT_01017 - putative redox protein, at 1,141,634 to 1,142,398
_01017
H281DRAFT_01018: H281DRAFT_01018 - transcriptional regulator, AraC family, at 1,142,613 to 1,143,569
_01018
Position (kb) 1141
1142
1143 Strain fitness (log2 ratio) -1
0
1 at 1140.808 kb on + strand at 1141.109 kb on + strand, within H281DRAFT_01016 at 1141.354 kb on + strand, within H281DRAFT_01016 at 1141.381 kb on + strand, within H281DRAFT_01016 at 1141.488 kb on - strand, within H281DRAFT_01016 at 1142.508 kb on - strand at 1142.661 kb on + strand at 1143.297 kb on - strand, within H281DRAFT_01018
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,140,808 + +0.3 1,141,109 + H281DRAFT_01016 0.29 +0.0 1,141,354 + H281DRAFT_01016 0.68 +0.2 1,141,381 + H281DRAFT_01016 0.72 +0.3 1,141,488 - H281DRAFT_01016 0.89 -0.2 1,142,508 - -0.6 1,142,661 + +1.1 1,143,297 - H281DRAFT_01018 0.71 +0.4
Or see this region's nucleotide sequence