Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00804 and H281DRAFT_00805 are separated by 6 nucleotides H281DRAFT_00805 and H281DRAFT_00806 are separated by 197 nucleotides H281DRAFT_00806 and H281DRAFT_00807 are separated by 25 nucleotides
H281DRAFT_00804: H281DRAFT_00804 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 891,418 to 892,470
_00804
H281DRAFT_00805: H281DRAFT_00805 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 892,477 to 893,637
_00805
H281DRAFT_00806: H281DRAFT_00806 - Membrane transporters of cations and cationic drugs, at 893,835 to 894,206
_00806
H281DRAFT_00807: H281DRAFT_00807 - 4-amino-4-deoxy-L-arabinose transferase, at 894,232 to 895,953
_00807
Position (kb) 892
893
894 Strain fitness (log2 ratio) -2
-1
0
1 at 893.642 kb on - strand at 893.642 kb on - strand at 893.758 kb on - strand at 893.795 kb on - strand at 893.795 kb on - strand at 893.851 kb on - strand at 893.851 kb on - strand at 893.851 kb on - strand at 893.851 kb on - strand at 893.921 kb on - strand, within H281DRAFT_00806 at 893.948 kb on - strand, within H281DRAFT_00806 at 894.029 kb on - strand, within H281DRAFT_00806 at 894.226 kb on - strand at 894.233 kb on + strand at 894.234 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 893,642 - -0.7 893,642 - +0.5 893,758 - +0.9 893,795 - -2.7 893,795 - -0.8 893,851 - +0.7 893,851 - -0.3 893,851 - -0.5 893,851 - -1.0 893,921 - H281DRAFT_00806 0.23 -1.2 893,948 - H281DRAFT_00806 0.30 -0.1 894,029 - H281DRAFT_00806 0.52 +0.2 894,226 - +0.1 894,233 + -0.1 894,234 - -0.1
Or see this region's nucleotide sequence