Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00504 and H281DRAFT_00505 are separated by 109 nucleotides H281DRAFT_00505 and H281DRAFT_00506 are separated by 47 nucleotides H281DRAFT_00506 and H281DRAFT_00507 are separated by 6 nucleotides
H281DRAFT_00504: H281DRAFT_00504 - hypothetical protein, at 565,512 to 566,345
_00504
H281DRAFT_00505: H281DRAFT_00505 - tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, at 566,455 to 567,090
_00505
H281DRAFT_00506: H281DRAFT_00506 - Zn-dependent protease (includes SpoIVFB), at 567,138 to 567,800
_00506
H281DRAFT_00507: H281DRAFT_00507 - tryptophanyl-tRNA synthetase, at 567,807 to 569,009
_00507
Position (kb) 567
568 Strain fitness (log2 ratio) -1
0
1 at 566.419 kb on + strand at 566.743 kb on + strand, within H281DRAFT_00505 at 566.743 kb on + strand, within H281DRAFT_00505 at 566.743 kb on + strand, within H281DRAFT_00505 at 566.744 kb on - strand, within H281DRAFT_00505 at 566.891 kb on + strand, within H281DRAFT_00505 at 567.124 kb on + strand at 567.125 kb on - strand at 567.125 kb on - strand at 567.137 kb on + strand at 567.154 kb on + strand at 567.255 kb on + strand, within H281DRAFT_00506 at 567.366 kb on + strand, within H281DRAFT_00506 at 567.755 kb on + strand at 567.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 566,419 + -0.2 566,743 + H281DRAFT_00505 0.45 +0.6 566,743 + H281DRAFT_00505 0.45 +0.8 566,743 + H281DRAFT_00505 0.45 -0.1 566,744 - H281DRAFT_00505 0.45 -0.4 566,891 + H281DRAFT_00505 0.69 -0.3 567,124 + -0.3 567,125 - -0.6 567,125 - -0.0 567,137 + -1.4 567,154 + -1.1 567,255 + H281DRAFT_00506 0.18 -1.0 567,366 + H281DRAFT_00506 0.34 -0.9 567,755 + +1.0 567,755 + +0.3
Or see this region's nucleotide sequence