Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00333 and H281DRAFT_00334 are separated by 172 nucleotides H281DRAFT_00334 and H281DRAFT_00335 are separated by 217 nucleotides H281DRAFT_00335 and H281DRAFT_00336 are separated by 49 nucleotides
H281DRAFT_00333: H281DRAFT_00333 - L-ascorbate metabolism protein UlaG, beta-lactamase superfamily, at 365,763 to 366,542
_00333
H281DRAFT_00334: H281DRAFT_00334 - transcriptional regulator, LysR family, at 366,715 to 367,599
_00334
H281DRAFT_00335: H281DRAFT_00335 - short chain dehydrogenase, at 367,817 to 368,149
_00335
H281DRAFT_00336: H281DRAFT_00336 - carbonic anhydrase, at 368,199 to 368,876
_00336
Position (kb) 366
367
368 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 365.732 kb on + strand at 365.733 kb on - strand at 366.071 kb on - strand, within H281DRAFT_00333 at 366.352 kb on - strand, within H281DRAFT_00333 at 366.361 kb on - strand, within H281DRAFT_00333 at 366.440 kb on - strand, within H281DRAFT_00333 at 366.611 kb on + strand at 366.895 kb on + strand, within H281DRAFT_00334 at 366.945 kb on + strand, within H281DRAFT_00334 at 367.219 kb on - strand, within H281DRAFT_00334 at 367.252 kb on + strand, within H281DRAFT_00334 at 367.252 kb on + strand, within H281DRAFT_00334 at 367.413 kb on - strand, within H281DRAFT_00334 at 367.771 kb on - strand at 367.787 kb on + strand at 367.984 kb on + strand, within H281DRAFT_00335 at 368.124 kb on + strand at 368.291 kb on - strand, within H281DRAFT_00336 at 368.502 kb on - strand, within H281DRAFT_00336 at 368.539 kb on + strand, within H281DRAFT_00336 at 368.542 kb on - strand, within H281DRAFT_00336
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 365,732 + +0.2 365,733 - +0.6 366,071 - H281DRAFT_00333 0.39 -1.2 366,352 - H281DRAFT_00333 0.76 -0.3 366,361 - H281DRAFT_00333 0.77 +1.3 366,440 - H281DRAFT_00333 0.87 -0.1 366,611 + -0.3 366,895 + H281DRAFT_00334 0.20 +0.1 366,945 + H281DRAFT_00334 0.26 -0.7 367,219 - H281DRAFT_00334 0.57 +0.2 367,252 + H281DRAFT_00334 0.61 -0.3 367,252 + H281DRAFT_00334 0.61 -0.2 367,413 - H281DRAFT_00334 0.79 -0.7 367,771 - +1.7 367,787 + +2.9 367,984 + H281DRAFT_00335 0.50 +0.4 368,124 + -0.4 368,291 - H281DRAFT_00336 0.14 +0.1 368,502 - H281DRAFT_00336 0.45 -0.2 368,539 + H281DRAFT_00336 0.50 -1.8 368,542 - H281DRAFT_00336 0.51 -0.3
Or see this region's nucleotide sequence