Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16120

Experiment: Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG
3,662,610	+		PFLU_RS16115	0.67	+0.1
3,662,611	-		PFLU_RS16115	0.67	+0.9
3,662,640	+		PFLU_RS16115	0.69	-2.3
3,662,640	+		PFLU_RS16115	0.69	+0.6
3,662,677	+		PFLU_RS16115	0.71	-1.0
3,662,678	-		PFLU_RS16115	0.71	+1.4
3,662,678	-		PFLU_RS16115	0.71	-0.0
3,662,678	-		PFLU_RS16115	0.71	+0.0
3,662,718	+		PFLU_RS16115	0.74	-1.6
3,662,718	+		PFLU_RS16115	0.74	+0.1
3,662,719	-		PFLU_RS16115	0.74	+0.2
3,662,764	+		PFLU_RS16115	0.76	-1.6
3,662,765	-		PFLU_RS16115	0.76	+0.5
3,662,765	-		PFLU_RS16115	0.76	+0.5
3,662,807	+		PFLU_RS16115	0.79	-2.0
3,662,807	+		PFLU_RS16115	0.79	-2.2
3,662,944	+		PFLU_RS16115	0.86	-2.1
3,663,201	-				-1.4
3,663,261	+				-0.5
3,663,523	+		PFLU_RS16120	0.39	-3.2
3,663,523	+		PFLU_RS16120	0.39	-1.2
3,663,523	+		PFLU_RS16120	0.39	-1.4
3,663,523	+		PFLU_RS16120	0.39	-1.0
3,663,524	-		PFLU_RS16120	0.40	-1.1
3,663,524	-		PFLU_RS16120	0.40	+1.2
3,663,524	-		PFLU_RS16120	0.40	-2.2
3,663,574	-		PFLU_RS16120	0.48	-0.7
3,663,574	-		PFLU_RS16120	0.48	+0.5
3,663,574	-		PFLU_RS16120	0.48	-1.1
3,663,780	+		PFLU_RS16120	0.81	-1.3
3,663,842	+				-0.9
3,663,842	+				-1.6
3,663,876	+				-1.2
3,663,876	+				-0.3
3,663,876	+				+0.2
3,663,877	-				-1.1
3,663,877	-				-0.8
3,663,877	-				-2.3
3,663,899	+				+1.0
3,663,899	+				-0.4
3,663,900	-				+1.0
3,663,907	+				-0.9
3,663,907	+				-2.2
3,663,907	+				-0.8
3,663,907	+				-0.7
3,663,907	+				-0.3
3,663,907	+				+0.5
3,663,907	+				-0.5
3,663,907	+				-1.4
3,663,907	+				-0.7
3,663,907	+				-0.5
3,663,907	+				+0.1
3,663,907	+				+0.1
3,663,907	+				-0.1
3,663,907	+				+0.1
3,663,907	+				-0.6
3,663,907	+				+0.4
3,663,907	+				-0.0
3,663,907	+				+0.3
3,663,907	+				-2.2
3,663,907	+				+0.7
3,663,907	+				-1.7
3,663,907	+				-1.4
3,663,907	+				+1.2
3,663,907	+				+0.6
3,663,907	+				+0.3
3,663,907	+				+0.0
3,663,907	+				-0.1
3,663,907	+				+0.5
3,663,907	+				+0.5
3,663,908	-				-1.6
3,663,908	-				-1.4
3,663,908	-				+0.6
3,663,908	-				+0.6
3,663,908	-				-0.4
3,663,908	-				-1.5
3,663,908	-				-0.3
3,663,908	-				+1.0
3,663,908	-				+1.1
3,663,908	-				-0.3
3,663,908	-				+0.2
3,663,908	-				+0.2
3,663,908	-				-0.6
3,663,908	-				-0.5
3,663,908	-				+0.1
3,663,908	-				-0.8
3,663,908	-				+1.6
3,663,908	-				-0.1
3,663,908	-				+0.4
3,663,908	-				-0.2
3,663,909	+				+0.2
3,663,909	+				-0.6
3,663,909	+				-0.3
3,663,909	+				-0.9
3,663,909	+				+0.8
3,663,909	+				-0.5
3,663,909	+				-0.1
3,663,909	+				-0.3
3,663,909	+				+0.6
3,663,909	+				-0.4
3,663,910	-				-0.6
3,663,910	-				-1.2
3,663,910	-				+0.2
3,663,910	-				+1.4
3,663,910	-				-1.4
3,663,910	-				+0.8
3,663,911	+				+1.2
3,663,911	+				-1.4
3,663,912	-				-0.9
3,663,912	-				+0.7
3,663,912	-				-0.2
3,663,912	-				-1.0
3,663,912	-				+0.5
3,663,912	-				-2.2
3,663,918	+				+1.4
3,663,932	+				+0.3
3,663,932	+				-1.4
3,663,932	+				-0.7
3,663,933	-				+1.3
3,663,933	-				+1.6
3,663,933	-				-1.3
3,664,004	+				-2.2
3,664,004	+				+0.6
3,664,004	+				+0.0
3,664,005	-				+1.9
3,664,005	-				-1.7
3,664,005	-				-0.9
3,664,005	-				-1.2
3,664,022	+				+0.6
3,664,022	+				-0.7
3,664,022	+				-1.8
3,664,022	+				+0.6
3,664,022	+				-0.5
3,664,022	+				+1.5
3,664,022	+				+0.1
3,664,024	+				-1.2
3,664,024	+				-0.8
3,664,025	-				-0.3
3,664,025	-				+1.3
3,664,025	-				-1.3
3,664,025	-				+1.1
3,664,193	+				+1.2
3,664,193	+				-0.5
3,664,193	+				+0.2
3,664,193	+				-0.6
3,664,193	+				-0.2
3,664,193	+				-2.0
3,664,193	+				+0.2
3,664,193	+				-0.7
3,664,193	+				-0.6
3,664,193	+				-2.8
3,664,193	+				-0.9
3,664,193	+				+0.3
3,664,193	+				-1.6
3,664,193	+				+0.9
3,664,193	+				-0.9
3,664,193	+				+0.2
3,664,193	+				-2.4
3,664,193	+				+0.1
3,664,193	+				-0.3
3,664,193	+				+1.6
3,664,193	+				+1.2
3,664,193	+				-0.6
3,664,193	+				+0.9
3,664,193	+				-0.5
3,664,193	+				+0.4
3,664,194	-				-0.6
3,664,194	-				-0.4
3,664,194	-				+1.0
3,664,194	-				+0.3
3,664,194	-				+0.2
3,664,194	-				+0.1
3,664,194	-				-0.1
3,664,194	-				+0.1
3,664,194	-				-0.1
3,664,194	-				-0.7
3,664,194	-				-1.5
3,664,194	-				-0.2
3,664,194	-				-1.2
3,664,194	-				-1.1
3,664,194	-				+0.9
3,664,194	-				-0.7
3,664,194	-				+0.1
3,664,194	-				+1.3
3,664,194	-				-0.5
3,664,194	-				+1.9
3,664,194	-				-0.6
3,664,194	-				-0.9
3,664,194	-				-1.3
3,664,194	-				+1.1
3,664,194	-				+0.6
3,664,194	-				-0.8
3,664,194	-				-0.2
3,664,194	-				+0.3
3,664,194	-				-0.4
3,664,194	-				+1.2
3,664,194	-				+1.3
3,664,307	+		PFLU_RS16125	0.20	+0.5
3,664,307	+		PFLU_RS16125	0.20	+0.7
3,664,307	+		PFLU_RS16125	0.20	-0.5
3,664,307	+		PFLU_RS16125	0.20	+0.1
3,664,307	+		PFLU_RS16125	0.20	-0.2
3,664,307	+		PFLU_RS16125	0.20	+1.3
3,664,308	-		PFLU_RS16125	0.20	-1.9
3,664,308	-		PFLU_RS16125	0.20	+1.0
3,664,308	-		PFLU_RS16125	0.20	+0.3
3,664,308	-		PFLU_RS16125	0.20	-2.0
3,664,308	-		PFLU_RS16125	0.20	+0.5
3,664,308	-		PFLU_RS16125	0.20	-1.9
3,664,488	+		PFLU_RS16125	0.36	+1.1
3,664,488	+		PFLU_RS16125	0.36	-1.3
3,664,488	+		PFLU_RS16125	0.36	+0.5
3,664,489	-		PFLU_RS16125	0.36	+1.9
3,664,532	+		PFLU_RS16125	0.40	-2.0
3,664,533	-		PFLU_RS16125	0.40	-1.4
3,664,533	-		PFLU_RS16125	0.40	-0.5
3,664,533	-		PFLU_RS16125	0.40	-1.7
3,664,533	-		PFLU_RS16125	0.40	+0.3
3,664,541	+		PFLU_RS16125	0.41	-0.3
3,664,541	+		PFLU_RS16125	0.41	-0.1
3,664,541	+		PFLU_RS16125	0.41	-0.2
3,664,542	-		PFLU_RS16125	0.41	-0.6
3,664,542	-		PFLU_RS16125	0.41	+0.5
3,664,542	-		PFLU_RS16125	0.41	+0.5
3,664,576	+		PFLU_RS16125	0.44	-2.9
3,664,576	+		PFLU_RS16125	0.44	-0.1
3,664,576	+		PFLU_RS16125	0.44	-0.4
3,664,576	+		PFLU_RS16125	0.44	-1.0
3,664,576	+		PFLU_RS16125	0.44	-0.1
3,664,576	+		PFLU_RS16125	0.44	-0.4
3,664,577	-		PFLU_RS16125	0.44	-0.2
3,664,577	-		PFLU_RS16125	0.44	-1.0
3,664,577	-		PFLU_RS16125	0.44	-1.2
3,664,577	-		PFLU_RS16125	0.44	+1.4
3,664,577	-		PFLU_RS16125	0.44	-0.7
3,664,577	-		PFLU_RS16125	0.44	-1.8
3,664,577	-		PFLU_RS16125	0.44	-0.5
3,664,577	-		PFLU_RS16125	0.44	-1.9
3,664,580	+		PFLU_RS16125	0.45	-0.8
3,664,580	+		PFLU_RS16125	0.45	-2.3
3,664,580	+		PFLU_RS16125	0.45	-0.1
3,664,580	+		PFLU_RS16125	0.45	-1.9
3,664,580	+		PFLU_RS16125	0.45	+1.4
3,664,580	+		PFLU_RS16125	0.45	-1.6
3,664,580	+		PFLU_RS16125	0.45	-1.0
3,664,580	+		PFLU_RS16125	0.45	-0.4
3,664,580	+		PFLU_RS16125	0.45	-0.1
3,664,581	-		PFLU_RS16125	0.45	-0.3
3,664,581	-		PFLU_RS16125	0.45	-1.2
3,664,581	-		PFLU_RS16125	0.45	-0.1
3,664,581	-		PFLU_RS16125	0.45	+0.0
3,664,581	-		PFLU_RS16125	0.45	-1.6
3,664,581	-		PFLU_RS16125	0.45	+0.4
3,664,581	-		PFLU_RS16125	0.45	-2.2
3,664,581	-		PFLU_RS16125	0.45	-0.4
3,664,619	+		PFLU_RS16125	0.48	-0.7
3,664,619	+		PFLU_RS16125	0.48	-0.1
3,664,619	+		PFLU_RS16125	0.48	-0.2
3,664,619	+		PFLU_RS16125	0.48	+1.3
3,664,619	+		PFLU_RS16125	0.48	-1.7
3,664,619	+		PFLU_RS16125	0.48	+0.8
3,664,619	+		PFLU_RS16125	0.48	-2.2
3,664,619	+		PFLU_RS16125	0.48	+1.4
3,664,619	+		PFLU_RS16125	0.48	+0.4
3,664,620	-		PFLU_RS16125	0.48	-1.2
3,664,677	+		PFLU_RS16125	0.53	+1.3
3,664,677	+		PFLU_RS16125	0.53	-0.2
3,664,678	-		PFLU_RS16125	0.54	+0.5
3,664,773	-		PFLU_RS16125	0.62	-0.1
3,664,800	-		PFLU_RS16125	0.65	-1.8
3,664,800	-		PFLU_RS16125	0.65	+0.2
3,664,811	+		PFLU_RS16125	0.66	+1.2