Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09865

Experiment: Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG
2,169,941	+		PFLU_RS09860	0.10	-2.0
2,169,941	+		PFLU_RS09860	0.10	-3.4
2,170,172	+		PFLU_RS09860	0.34	-2.7
2,170,173	-		PFLU_RS09860	0.34	+0.8
2,170,173	-		PFLU_RS09860	0.34	+0.0
2,170,209	+		PFLU_RS09860	0.38	-0.7
2,170,210	-		PFLU_RS09860	0.38	+0.2
2,170,229	+		PFLU_RS09860	0.40	-1.8
2,170,229	+		PFLU_RS09860	0.40	-0.5
2,170,229	+		PFLU_RS09860	0.40	-2.8
2,170,229	+		PFLU_RS09860	0.40	-2.8
2,170,230	-		PFLU_RS09860	0.40	-0.1
2,170,230	-		PFLU_RS09860	0.40	-0.7
2,170,230	-		PFLU_RS09860	0.40	+0.4
2,170,230	-		PFLU_RS09860	0.40	+1.5
2,170,230	-		PFLU_RS09860	0.40	-1.4
2,170,230	-		PFLU_RS09860	0.40	+0.7
2,170,230	-		PFLU_RS09860	0.40	-0.5
2,170,394	+		PFLU_RS09860	0.57	-2.3
2,170,394	+		PFLU_RS09860	0.57	-1.6
2,170,394	+		PFLU_RS09860	0.57	+0.4
2,170,395	-		PFLU_RS09860	0.57	-0.9
2,170,395	-		PFLU_RS09860	0.57	+1.2
2,170,397	+		PFLU_RS09860	0.57	-2.3
2,170,397	+		PFLU_RS09860	0.57	-3.5
2,170,397	+		PFLU_RS09860	0.57	-1.2
2,170,397	+		PFLU_RS09860	0.57	-1.3
2,170,398	-		PFLU_RS09860	0.57	+0.2
2,170,398	-		PFLU_RS09860	0.57	+2.2
2,170,398	-		PFLU_RS09860	0.57	+0.6
2,170,398	-		PFLU_RS09860	0.57	-2.2
2,170,769	+				-1.9
2,170,769	+				-1.1
2,170,769	+				-2.1
2,170,769	+				-3.0
2,170,769	+				-3.6
2,170,769	+				-4.2
2,170,770	-				-1.5
2,170,770	-				-0.9
2,170,770	-				-1.3
2,170,772	-				-2.0
2,170,843	+				-1.1
2,170,844	-				-2.7
2,171,051	+				-1.8
2,171,052	-				-0.4
2,171,052	-				+0.4
2,171,052	-				-0.2
2,171,052	-				+0.9
2,171,052	-				+0.3
2,171,052	-				-0.8
2,171,084	+		PFLU_RS09865	0.12	-3.0
2,171,085	-		PFLU_RS09865	0.12	+0.6
2,171,085	-		PFLU_RS09865	0.12	+0.6
2,171,132	+		PFLU_RS09865	0.16	-2.6
2,171,264	+		PFLU_RS09865	0.26	-2.5
2,171,264	+		PFLU_RS09865	0.26	-3.4
2,171,264	+		PFLU_RS09865	0.26	-1.1
2,171,264	+		PFLU_RS09865	0.26	-3.3
2,171,264	+		PFLU_RS09865	0.26	-2.5
2,171,264	+		PFLU_RS09865	0.26	-3.9
2,171,264	+		PFLU_RS09865	0.26	-3.2
2,171,264	+		PFLU_RS09865	0.26	-2.1
2,171,264	+		PFLU_RS09865	0.26	-2.9
2,171,264	+		PFLU_RS09865	0.26	-1.9
2,171,264	+		PFLU_RS09865	0.26	-2.8
2,171,264	+		PFLU_RS09865	0.26	-1.8
2,171,264	+		PFLU_RS09865	0.26	-2.1
2,171,264	+		PFLU_RS09865	0.26	-0.1
2,171,265	-		PFLU_RS09865	0.26	+0.4
2,171,265	-		PFLU_RS09865	0.26	-1.2
2,171,265	-		PFLU_RS09865	0.26	-2.3
2,171,265	-		PFLU_RS09865	0.26	-0.2
2,171,265	-		PFLU_RS09865	0.26	-1.7
2,171,265	-		PFLU_RS09865	0.26	+2.6
2,171,265	-		PFLU_RS09865	0.26	+0.1
2,171,265	-		PFLU_RS09865	0.26	+0.4
2,171,267	+		PFLU_RS09865	0.26	-1.5
2,171,267	+		PFLU_RS09865	0.26	-3.5
2,171,267	+		PFLU_RS09865	0.26	-1.8
2,171,268	-		PFLU_RS09865	0.26	-1.5
2,171,268	-		PFLU_RS09865	0.26	-0.7
2,171,268	-		PFLU_RS09865	0.26	-0.6
2,171,274	+		PFLU_RS09865	0.26	-2.8
2,171,275	-		PFLU_RS09865	0.26	-2.1
2,171,316	-		PFLU_RS09865	0.30	-0.9
2,171,360	+		PFLU_RS09865	0.33	-3.2
2,171,360	+		PFLU_RS09865	0.33	-1.5
2,171,361	-		PFLU_RS09865	0.33	+0.5
2,171,361	-		PFLU_RS09865	0.33	-1.0
2,171,361	-		PFLU_RS09865	0.33	-0.5
2,171,433	-		PFLU_RS09865	0.38	-0.8
2,171,555	+		PFLU_RS09865	0.48	-2.7
2,171,555	+		PFLU_RS09865	0.48	-3.4
2,171,555	+		PFLU_RS09865	0.48	-0.6
2,171,555	+		PFLU_RS09865	0.48	-2.8
2,171,555	+		PFLU_RS09865	0.48	-1.6
2,171,555	+		PFLU_RS09865	0.48	+1.8
2,171,555	+		PFLU_RS09865	0.48	-2.2
2,171,555	+		PFLU_RS09865	0.48	-1.8
2,171,555	+		PFLU_RS09865	0.48	-2.3
2,171,555	+		PFLU_RS09865	0.48	-2.5
2,171,555	+		PFLU_RS09865	0.48	-1.4
2,171,555	+		PFLU_RS09865	0.48	-1.9
2,171,556	-		PFLU_RS09865	0.48	+3.4
2,171,556	-		PFLU_RS09865	0.48	-1.6
2,171,556	-		PFLU_RS09865	0.48	-1.6
2,171,556	-		PFLU_RS09865	0.48	+0.6
2,171,556	-		PFLU_RS09865	0.48	-3.4
2,171,556	-		PFLU_RS09865	0.48	+0.7
2,171,595	-		PFLU_RS09865	0.51	-1.5
2,171,595	-		PFLU_RS09865	0.51	-0.8
2,171,614	+		PFLU_RS09865	0.52	-1.0
2,171,615	-		PFLU_RS09865	0.52	-1.5
2,171,628	-		PFLU_RS09865	0.53	-2.8
2,171,660	+		PFLU_RS09865	0.56	-2.0
2,171,676	+		PFLU_RS09865	0.57	-1.8
2,171,676	+		PFLU_RS09865	0.57	-1.3
2,171,680	+		PFLU_RS09865	0.57	-2.8
2,171,680	+		PFLU_RS09865	0.57	-2.8
2,171,681	-		PFLU_RS09865	0.57	-0.8
2,171,699	+		PFLU_RS09865	0.59	-3.2
2,171,699	+		PFLU_RS09865	0.59	-2.7
2,171,699	+		PFLU_RS09865	0.59	-0.9
2,171,699	+		PFLU_RS09865	0.59	-2.5
2,171,700	-		PFLU_RS09865	0.59	-1.3
2,171,700	-		PFLU_RS09865	0.59	-1.7
2,171,700	-		PFLU_RS09865	0.59	-0.9
2,171,700	-		PFLU_RS09865	0.59	-1.5
2,171,763	+		PFLU_RS09865	0.63	-1.5
2,171,763	+		PFLU_RS09865	0.63	-3.5
2,171,764	-		PFLU_RS09865	0.63	-1.1
2,171,831	+		PFLU_RS09865	0.68	-2.5
2,171,831	+		PFLU_RS09865	0.68	-2.5
2,171,831	+		PFLU_RS09865	0.68	-0.5
2,171,831	+		PFLU_RS09865	0.68	-3.2
2,171,831	+		PFLU_RS09865	0.68	-1.7
2,171,831	+		PFLU_RS09865	0.68	-1.9
2,171,831	+		PFLU_RS09865	0.68	-2.3
2,171,832	-		PFLU_RS09865	0.69	-2.2
2,171,832	-		PFLU_RS09865	0.69	-2.1
2,171,832	-		PFLU_RS09865	0.69	-0.1
2,171,832	-		PFLU_RS09865	0.69	-0.2
2,171,832	-		PFLU_RS09865	0.69	-3.0
2,171,832	-		PFLU_RS09865	0.69	-1.2
2,171,832	-		PFLU_RS09865	0.69	-1.7
2,171,832	-		PFLU_RS09865	0.69	-1.8
2,171,832	-		PFLU_RS09865	0.69	-1.7
2,171,834	+		PFLU_RS09865	0.69	-3.8
2,171,835	-		PFLU_RS09865	0.69	-2.0
2,171,835	-		PFLU_RS09865	0.69	-2.1
2,171,892	-		PFLU_RS09865	0.73	-1.2
2,171,892	-		PFLU_RS09865	0.73	-0.3
2,171,892	-		PFLU_RS09865	0.73	-1.5
2,171,892	-		PFLU_RS09865	0.73	-0.6
2,171,953	+		PFLU_RS09865	0.78	-4.1
2,171,953	+		PFLU_RS09865	0.78	-3.2
2,171,953	+		PFLU_RS09865	0.78	-1.6
2,171,953	+		PFLU_RS09865	0.78	-0.2
2,171,953	+		PFLU_RS09865	0.78	+0.3
2,171,953	+		PFLU_RS09865	0.78	-0.5
2,171,954	-		PFLU_RS09865	0.78	-2.3
2,171,954	-		PFLU_RS09865	0.78	+0.2
2,171,954	-		PFLU_RS09865	0.78	-1.9
2,171,957	+		PFLU_RS09865	0.78	+1.8
2,171,957	+		PFLU_RS09865	0.78	-0.5
2,171,957	+		PFLU_RS09865	0.78	-1.7
2,171,957	+		PFLU_RS09865	0.78	-2.0
2,171,957	+		PFLU_RS09865	0.78	-3.2
2,171,957	+		PFLU_RS09865	0.78	-1.8
2,171,958	-		PFLU_RS09865	0.78	-0.9
2,171,958	-		PFLU_RS09865	0.78	-0.2
2,171,958	-		PFLU_RS09865	0.78	-2.5
2,171,958	-		PFLU_RS09865	0.78	-0.1
2,171,958	-		PFLU_RS09865	0.78	-2.1
2,171,958	-		PFLU_RS09865	0.78	-2.1
2,171,961	+		PFLU_RS09865	0.78	-3.2
2,171,961	+		PFLU_RS09865	0.78	-3.7
2,171,961	+		PFLU_RS09865	0.78	-2.0
2,171,961	+		PFLU_RS09865	0.78	-2.6
2,171,961	+		PFLU_RS09865	0.78	-2.3
2,171,961	+		PFLU_RS09865	0.78	-1.5
2,171,961	+		PFLU_RS09865	0.78	-3.0
2,171,961	+		PFLU_RS09865	0.78	-2.5
2,171,961	+		PFLU_RS09865	0.78	-3.4
2,171,962	-		PFLU_RS09865	0.78	-1.8
2,171,962	-		PFLU_RS09865	0.78	-2.9
2,171,962	-		PFLU_RS09865	0.78	-2.5
2,171,962	-		PFLU_RS09865	0.78	-3.2
2,171,962	-		PFLU_RS09865	0.78	-2.8
2,171,962	-		PFLU_RS09865	0.78	-2.2
2,171,965	+		PFLU_RS09865	0.79	-4.2
2,171,966	-		PFLU_RS09865	0.79	-3.6
2,171,978	+		PFLU_RS09865	0.80	-2.1
2,171,978	+		PFLU_RS09865	0.80	-1.1
2,171,979	-		PFLU_RS09865	0.80	-1.0
2,171,979	-		PFLU_RS09865	0.80	-2.2
2,172,246	-				-2.1
2,172,258	+				-3.3
2,172,258	+				-3.5
2,172,259	-				-1.0
2,172,259	-				-1.0
2,172,259	-				-1.9
2,172,261	+				-1.4
2,172,261	+				-2.0
2,172,261	+				-1.7
2,172,262	-				-1.4
2,172,262	-				-2.9
2,172,262	-				-2.2
2,172,262	-				-1.3
2,172,262	-				+0.1
2,172,262	-				-2.3
2,172,262	-				-1.7
2,172,337	+				-0.1
2,172,337	+				-1.0
2,172,337	+				-1.7
2,172,337	+				-2.9
2,172,337	+				-3.0
2,172,337	+				-1.6
2,172,337	+				-1.4
2,172,337	+				-2.5
2,172,337	+				-1.0
2,172,337	+				-2.9
2,172,337	+				-1.3
2,172,337	+				-3.8
2,172,337	+				-1.4
2,172,337	+				-1.2
2,172,337	+				-3.0
2,172,337	+				-2.7
2,172,338	-				-4.3
2,172,338	-				-1.5
2,172,338	-				-3.1
2,172,338	-				-2.9
2,172,338	-				-2.7
2,172,338	-				-3.7
2,172,338	-				-3.0
2,172,338	-				-1.7
2,172,338	-				-2.7
2,172,338	-				-1.2
2,172,338	-				-2.1
2,172,338	-				-0.8
2,172,338	-				-3.2
2,172,340	-				-1.8
2,172,340	-				-3.2
2,172,347	+				-1.4
2,172,347	+				-1.1
2,172,347	+				-4.1
2,172,347	+				-0.5
2,172,348	-				-2.8
2,172,348	-				-2.2
2,172,395	+				-1.7
2,172,395	+				-2.4
2,172,395	+				-3.2
2,172,396	-				-2.5
2,172,396	-				-2.3
2,172,396	-				-3.0
2,172,396	-				-1.9
2,172,396	-				-2.1
2,172,396	-				-3.2
2,172,413	+				-0.5
2,172,413	+				-4.2
2,172,413	+				-2.3
2,172,413	+				-0.5
2,172,413	+				-3.5
2,172,413	+				-1.2
2,172,414	-				-2.1
2,172,414	-				-1.4
2,172,414	-				-1.8
2,172,460	+				+1.4
2,172,461	-				+1.4
2,172,556	-		PFLU_RS09870	0.12	+1.1
2,172,556	-		PFLU_RS09870	0.12	+1.4
2,172,556	-		PFLU_RS09870	0.12	+1.0
2,172,617	+		PFLU_RS09870	0.17	+2.0
2,172,617	+		PFLU_RS09870	0.17	+0.6
2,172,618	-		PFLU_RS09870	0.17	+1.2
2,172,657	+		PFLU_RS09870	0.20	+1.4
2,172,657	+		PFLU_RS09870	0.20	+1.2
2,172,657	+		PFLU_RS09870	0.20	+2.3
2,172,658	-		PFLU_RS09870	0.20	+0.6
2,172,658	-		PFLU_RS09870	0.20	+2.0
2,172,658	-		PFLU_RS09870	0.20	+1.0
2,172,658	-		PFLU_RS09870	0.20	+2.4
2,172,669	+		PFLU_RS09870	0.21	+0.6
2,172,670	-		PFLU_RS09870	0.21	+2.0
2,172,675	+		PFLU_RS09870	0.22	+0.7
2,172,681	+		PFLU_RS09870	0.22	+0.7
2,172,681	+		PFLU_RS09870	0.22	+1.6
2,172,681	+		PFLU_RS09870	0.22	-0.8
2,172,682	-		PFLU_RS09870	0.22	+1.8
2,172,682	-		PFLU_RS09870	0.22	+1.9
2,172,682	-		PFLU_RS09870	0.22	+1.4
2,172,682	-		PFLU_RS09870	0.22	+0.6
2,172,733	-		PFLU_RS09870	0.26	+0.2
2,172,733	-		PFLU_RS09870	0.26	+0.9
2,172,798	+		PFLU_RS09870	0.32	+1.4
2,172,798	+		PFLU_RS09870	0.32	-0.0
2,172,798	+		PFLU_RS09870	0.32	+1.4
2,172,798	+		PFLU_RS09870	0.32	+1.1
2,172,798	+		PFLU_RS09870	0.32	+1.2
2,172,798	+		PFLU_RS09870	0.32	+1.0
2,172,798	+		PFLU_RS09870	0.32	+1.1
2,172,799	-		PFLU_RS09870	0.32	+1.6
2,172,799	-		PFLU_RS09870	0.32	+0.5
2,172,799	-		PFLU_RS09870	0.32	+0.6
2,172,873	+		PFLU_RS09870	0.38	+0.8
2,172,873	+		PFLU_RS09870	0.38	+0.1
2,172,874	-		PFLU_RS09870	0.38	+1.5
2,172,874	-		PFLU_RS09870	0.38	+0.7
2,172,874	-		PFLU_RS09870	0.38	+1.8
2,172,874	-		PFLU_RS09870	0.38	+0.9
2,172,874	-		PFLU_RS09870	0.38	-0.3
2,172,874	-		PFLU_RS09870	0.38	+2.5
2,172,874	-		PFLU_RS09870	0.38	+1.9
2,172,912	+		PFLU_RS09870	0.42	+0.9
2,172,912	+		PFLU_RS09870	0.42	+0.9
2,172,913	-		PFLU_RS09870	0.42	+1.0
2,172,915	+		PFLU_RS09870	0.42	+1.5
2,172,915	+		PFLU_RS09870	0.42	-0.4
2,172,915	+		PFLU_RS09870	0.42	+2.9
2,172,916	-		PFLU_RS09870	0.42	+0.4
2,172,916	-		PFLU_RS09870	0.42	-0.5
2,172,916	-		PFLU_RS09870	0.42	+0.4
2,172,916	-		PFLU_RS09870	0.42	+1.6
2,172,916	-		PFLU_RS09870	0.42	+1.0
2,172,938	+		PFLU_RS09870	0.44	+0.5
2,172,959	+		PFLU_RS09870	0.46	+1.8
2,172,959	+		PFLU_RS09870	0.46	-0.0
2,172,959	+		PFLU_RS09870	0.46	+1.4
2,172,959	+		PFLU_RS09870	0.46	+1.0
2,172,959	+		PFLU_RS09870	0.46	+2.0
2,172,959	+		PFLU_RS09870	0.46	+1.4
2,172,959	+		PFLU_RS09870	0.46	+2.0
2,172,959	+		PFLU_RS09870	0.46	+1.8
2,172,959	+		PFLU_RS09870	0.46	+1.4
2,172,959	+		PFLU_RS09870	0.46	+0.0
2,172,959	+		PFLU_RS09870	0.46	+0.4
2,172,960	-		PFLU_RS09870	0.46	+1.7
2,172,960	-		PFLU_RS09870	0.46	+2.5
2,172,960	-		PFLU_RS09870	0.46	+1.4
2,172,960	-		PFLU_RS09870	0.46	-0.2
2,172,960	-		PFLU_RS09870	0.46	+1.8
2,172,963	+		PFLU_RS09870	0.46	+1.6
2,172,963	+		PFLU_RS09870	0.46	+1.4
2,172,963	+		PFLU_RS09870	0.46	+1.7
2,172,964	-		PFLU_RS09870	0.46	+1.7
2,172,964	-		PFLU_RS09870	0.46	+1.2
2,172,964	-		PFLU_RS09870	0.46	+1.4
2,172,964	-		PFLU_RS09870	0.46	+1.7
2,172,964	-		PFLU_RS09870	0.46	+0.4
2,172,964	-		PFLU_RS09870	0.46	+1.2
2,172,993	+		PFLU_RS09870	0.48	+0.7
2,172,993	+		PFLU_RS09870	0.48	+1.5
2,172,993	+		PFLU_RS09870	0.48	+1.1
2,172,993	+		PFLU_RS09870	0.48	+1.3
2,172,993	+		PFLU_RS09870	0.48	+2.4
2,172,993	+		PFLU_RS09870	0.48	+1.1
2,172,993	+		PFLU_RS09870	0.48	+0.0
2,172,993	+		PFLU_RS09870	0.48	+1.7
2,172,993	+		PFLU_RS09870	0.48	+1.3
2,172,993	+		PFLU_RS09870	0.48	+2.3
2,172,994	-		PFLU_RS09870	0.49	+3.2
2,172,994	-		PFLU_RS09870	0.49	+1.0
2,172,994	-		PFLU_RS09870	0.49	+0.9
2,172,994	-		PFLU_RS09870	0.49	-0.3
2,172,994	-		PFLU_RS09870	0.49	+0.6
2,172,994	-		PFLU_RS09870	0.49	+0.9
2,172,994	-		PFLU_RS09870	0.49	+1.3
2,172,994	-		PFLU_RS09870	0.49	+1.8
2,172,994	-		PFLU_RS09870	0.49	+1.6
2,173,028	+		PFLU_RS09870	0.51	+0.8
2,173,028	+		PFLU_RS09870	0.51	+0.7
2,173,028	+		PFLU_RS09870	0.51	+2.2
2,173,029	-		PFLU_RS09870	0.52	+2.2
2,173,029	-		PFLU_RS09870	0.52	+1.3
2,173,164	+		PFLU_RS09870	0.63	+1.1
2,173,164	+		PFLU_RS09870	0.63	+1.3
2,173,164	+		PFLU_RS09870	0.63	+0.3
2,173,164	+		PFLU_RS09870	0.63	+1.4
2,173,164	+		PFLU_RS09870	0.63	+2.3
2,173,164	+		PFLU_RS09870	0.63	+4.8
2,173,164	+		PFLU_RS09870	0.63	+1.3
2,173,165	-		PFLU_RS09870	0.63	+0.8
2,173,165	-		PFLU_RS09870	0.63	+0.7
2,173,165	-		PFLU_RS09870	0.63	+0.4
2,173,165	-		PFLU_RS09870	0.63	+0.9
2,173,165	-		PFLU_RS09870	0.63	+0.7
2,173,165	-		PFLU_RS09870	0.63	+1.7
2,173,165	-		PFLU_RS09870	0.63	+2.2