Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17030 and ABZR87_RS17035 are separated by 122 nucleotides ABZR87_RS17035 and ABZR87_RS17040 are separated by 456 nucleotides ABZR87_RS17040 and ABZR87_RS17045 are separated by 20 nucleotides
ABZR87_RS17030: ABZR87_RS17030 - ionic transporter y4hA, at 171,671 to 172,753
_RS17030
ABZR87_RS17035: ABZR87_RS17035 - spherulation-specific family 4 protein, at 172,876 to 173,730
_RS17035
ABZR87_RS17040: ABZR87_RS17040 - hypothetical protein, at 174,187 to 174,642
_RS17040
ABZR87_RS17045: ABZR87_RS17045 - LysR family transcriptional regulator, at 174,663 to 175,556
_RS17045
Position (kb) 172
173
174 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 172.176 kb on + strand, within ABZR87_RS17030 at 172.177 kb on - strand, within ABZR87_RS17030 at 172.218 kb on + strand, within ABZR87_RS17030 at 172.218 kb on + strand, within ABZR87_RS17030 at 172.218 kb on + strand, within ABZR87_RS17030 at 172.219 kb on - strand, within ABZR87_RS17030 at 172.293 kb on + strand, within ABZR87_RS17030 at 172.293 kb on + strand, within ABZR87_RS17030 at 172.294 kb on - strand, within ABZR87_RS17030 at 172.294 kb on - strand, within ABZR87_RS17030 at 172.294 kb on - strand, within ABZR87_RS17030 at 172.819 kb on + strand at 172.820 kb on - strand at 172.821 kb on + strand at 172.821 kb on + strand at 172.821 kb on + strand at 172.821 kb on + strand at 172.821 kb on + strand at 172.821 kb on + strand at 172.821 kb on + strand at 172.822 kb on - strand at 172.822 kb on - strand at 172.822 kb on - strand at 172.822 kb on - strand at 172.916 kb on + strand at 172.916 kb on + strand at 173.033 kb on + strand, within ABZR87_RS17035 at 173.063 kb on + strand, within ABZR87_RS17035 at 173.090 kb on + strand, within ABZR87_RS17035 at 173.090 kb on + strand, within ABZR87_RS17035 at 173.090 kb on + strand, within ABZR87_RS17035 at 173.091 kb on - strand, within ABZR87_RS17035 at 173.091 kb on - strand, within ABZR87_RS17035 at 173.091 kb on - strand, within ABZR87_RS17035 at 173.091 kb on - strand, within ABZR87_RS17035 at 173.099 kb on + strand, within ABZR87_RS17035 at 173.099 kb on + strand, within ABZR87_RS17035 at 173.100 kb on - strand, within ABZR87_RS17035 at 173.100 kb on - strand, within ABZR87_RS17035 at 173.156 kb on + strand, within ABZR87_RS17035 at 173.157 kb on - strand, within ABZR87_RS17035 at 173.157 kb on - strand, within ABZR87_RS17035 at 173.157 kb on - strand, within ABZR87_RS17035 at 173.198 kb on + strand, within ABZR87_RS17035 at 173.198 kb on + strand, within ABZR87_RS17035 at 173.198 kb on + strand, within ABZR87_RS17035 at 173.199 kb on - strand, within ABZR87_RS17035 at 173.199 kb on - strand, within ABZR87_RS17035 at 173.199 kb on - strand, within ABZR87_RS17035 at 173.199 kb on - strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.222 kb on + strand, within ABZR87_RS17035 at 173.223 kb on - strand, within ABZR87_RS17035 at 173.223 kb on - strand, within ABZR87_RS17035 at 173.223 kb on - strand, within ABZR87_RS17035 at 173.223 kb on - strand, within ABZR87_RS17035 at 173.223 kb on - strand, within ABZR87_RS17035 at 173.223 kb on - strand, within ABZR87_RS17035 at 173.228 kb on + strand, within ABZR87_RS17035 at 173.240 kb on + strand, within ABZR87_RS17035 at 173.240 kb on + strand, within ABZR87_RS17035 at 173.240 kb on + strand, within ABZR87_RS17035 at 173.240 kb on + strand, within ABZR87_RS17035 at 173.306 kb on + strand, within ABZR87_RS17035 at 173.306 kb on + strand, within ABZR87_RS17035 at 173.307 kb on - strand, within ABZR87_RS17035 at 173.318 kb on + strand, within ABZR87_RS17035 at 173.318 kb on + strand, within ABZR87_RS17035 at 173.318 kb on + strand, within ABZR87_RS17035 at 173.364 kb on - strand, within ABZR87_RS17035 at 173.379 kb on - strand, within ABZR87_RS17035 at 173.379 kb on - strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.429 kb on + strand, within ABZR87_RS17035 at 173.430 kb on - strand, within ABZR87_RS17035 at 173.430 kb on - strand, within ABZR87_RS17035 at 173.430 kb on - strand, within ABZR87_RS17035 at 173.430 kb on - strand, within ABZR87_RS17035 at 173.430 kb on - strand, within ABZR87_RS17035 at 173.430 kb on - strand, within ABZR87_RS17035 at 173.546 kb on + strand, within ABZR87_RS17035 at 173.547 kb on - strand, within ABZR87_RS17035 at 173.547 kb on - strand, within ABZR87_RS17035 at 173.547 kb on - strand, within ABZR87_RS17035 at 173.552 kb on + strand, within ABZR87_RS17035 at 173.552 kb on + strand, within ABZR87_RS17035 at 173.552 kb on + strand, within ABZR87_RS17035 at 173.552 kb on + strand, within ABZR87_RS17035 at 173.552 kb on + strand, within ABZR87_RS17035 at 173.552 kb on + strand, within ABZR87_RS17035 at 173.553 kb on - strand, within ABZR87_RS17035 at 173.553 kb on - strand, within ABZR87_RS17035 at 173.553 kb on - strand, within ABZR87_RS17035 at 173.553 kb on - strand, within ABZR87_RS17035 at 173.553 kb on - strand, within ABZR87_RS17035 at 173.631 kb on - strand, within ABZR87_RS17035 at 173.828 kb on + strand at 173.828 kb on + strand at 173.828 kb on + strand at 173.828 kb on + strand at 173.828 kb on + strand at 173.829 kb on - strand at 173.830 kb on + strand at 173.830 kb on + strand at 173.830 kb on + strand at 173.831 kb on - strand at 173.831 kb on - strand at 173.831 kb on - strand at 173.831 kb on - strand at 174.164 kb on + strand at 174.164 kb on + strand at 174.164 kb on + strand at 174.164 kb on + strand at 174.165 kb on - strand at 174.165 kb on - strand at 174.165 kb on - strand at 174.326 kb on - strand, within ABZR87_RS17040 at 174.326 kb on - strand, within ABZR87_RS17040 at 174.358 kb on + strand, within ABZR87_RS17040 at 174.358 kb on + strand, within ABZR87_RS17040 at 174.359 kb on - strand, within ABZR87_RS17040 at 174.410 kb on - strand, within ABZR87_RS17040 at 174.410 kb on - strand, within ABZR87_RS17040 at 174.410 kb on - strand, within ABZR87_RS17040 at 174.410 kb on - strand, within ABZR87_RS17040 at 174.410 kb on - strand, within ABZR87_RS17040 at 174.469 kb on + strand, within ABZR87_RS17040 at 174.469 kb on + strand, within ABZR87_RS17040 at 174.469 kb on + strand, within ABZR87_RS17040 at 174.469 kb on + strand, within ABZR87_RS17040 at 174.469 kb on + strand, within ABZR87_RS17040 at 174.470 kb on - strand, within ABZR87_RS17040 at 174.470 kb on - strand, within ABZR87_RS17040 at 174.470 kb on - strand, within ABZR87_RS17040 at 174.470 kb on - strand, within ABZR87_RS17040 at 174.589 kb on + strand, within ABZR87_RS17040 at 174.589 kb on + strand, within ABZR87_RS17040 at 174.590 kb on - strand, within ABZR87_RS17040
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 172,176 + ABZR87_RS17030 0.47 +1.8 172,177 - ABZR87_RS17030 0.47 -0.2 172,218 + ABZR87_RS17030 0.51 -0.1 172,218 + ABZR87_RS17030 0.51 -0.2 172,218 + ABZR87_RS17030 0.51 -0.7 172,219 - ABZR87_RS17030 0.51 +0.4 172,293 + ABZR87_RS17030 0.57 -0.5 172,293 + ABZR87_RS17030 0.57 -0.7 172,294 - ABZR87_RS17030 0.58 +0.5 172,294 - ABZR87_RS17030 0.58 -0.5 172,294 - ABZR87_RS17030 0.58 -0.9 172,819 + -0.8 172,820 - -0.0 172,821 + -0.1 172,821 + +0.1 172,821 + -0.3 172,821 + -1.9 172,821 + -0.5 172,821 + +1.0 172,821 + -0.3 172,822 - +0.0 172,822 - +0.6 172,822 - -0.3 172,822 - -0.4 172,916 + -0.9 172,916 + -0.1 173,033 + ABZR87_RS17035 0.18 -0.8 173,063 + ABZR87_RS17035 0.22 +0.3 173,090 + ABZR87_RS17035 0.25 -0.3 173,090 + ABZR87_RS17035 0.25 -0.9 173,090 + ABZR87_RS17035 0.25 -1.4 173,091 - ABZR87_RS17035 0.25 +0.4 173,091 - ABZR87_RS17035 0.25 -0.5 173,091 - ABZR87_RS17035 0.25 -0.1 173,091 - ABZR87_RS17035 0.25 +1.3 173,099 + ABZR87_RS17035 0.26 -0.2 173,099 + ABZR87_RS17035 0.26 -2.2 173,100 - ABZR87_RS17035 0.26 -0.8 173,100 - ABZR87_RS17035 0.26 -1.0 173,156 + ABZR87_RS17035 0.33 +1.8 173,157 - ABZR87_RS17035 0.33 +0.0 173,157 - ABZR87_RS17035 0.33 -0.3 173,157 - ABZR87_RS17035 0.33 -1.8 173,198 + ABZR87_RS17035 0.38 +0.6 173,198 + ABZR87_RS17035 0.38 +0.5 173,198 + ABZR87_RS17035 0.38 +0.2 173,199 - ABZR87_RS17035 0.38 -0.5 173,199 - ABZR87_RS17035 0.38 +0.8 173,199 - ABZR87_RS17035 0.38 +1.1 173,199 - ABZR87_RS17035 0.38 +0.5 173,222 + ABZR87_RS17035 0.40 -0.1 173,222 + ABZR87_RS17035 0.40 -1.0 173,222 + ABZR87_RS17035 0.40 -0.0 173,222 + ABZR87_RS17035 0.40 +0.4 173,222 + ABZR87_RS17035 0.40 -0.2 173,222 + ABZR87_RS17035 0.40 -0.3 173,222 + ABZR87_RS17035 0.40 +0.2 173,223 - ABZR87_RS17035 0.41 -0.6 173,223 - ABZR87_RS17035 0.41 +1.5 173,223 - ABZR87_RS17035 0.41 -0.2 173,223 - ABZR87_RS17035 0.41 -0.0 173,223 - ABZR87_RS17035 0.41 +0.9 173,223 - ABZR87_RS17035 0.41 -0.4 173,228 + ABZR87_RS17035 0.41 -0.3 173,240 + ABZR87_RS17035 0.43 -1.2 173,240 + ABZR87_RS17035 0.43 -0.4 173,240 + ABZR87_RS17035 0.43 -0.5 173,240 + ABZR87_RS17035 0.43 -0.0 173,306 + ABZR87_RS17035 0.50 -0.8 173,306 + ABZR87_RS17035 0.50 -1.4 173,307 - ABZR87_RS17035 0.50 +0.4 173,318 + ABZR87_RS17035 0.52 +0.9 173,318 + ABZR87_RS17035 0.52 -0.0 173,318 + ABZR87_RS17035 0.52 -0.3 173,364 - ABZR87_RS17035 0.57 -0.1 173,379 - ABZR87_RS17035 0.59 +1.2 173,379 - ABZR87_RS17035 0.59 +0.5 173,429 + ABZR87_RS17035 0.65 -0.5 173,429 + ABZR87_RS17035 0.65 +0.4 173,429 + ABZR87_RS17035 0.65 +1.0 173,429 + ABZR87_RS17035 0.65 -0.1 173,429 + ABZR87_RS17035 0.65 +0.7 173,429 + ABZR87_RS17035 0.65 -0.2 173,429 + ABZR87_RS17035 0.65 -0.6 173,429 + ABZR87_RS17035 0.65 -0.1 173,429 + ABZR87_RS17035 0.65 +0.1 173,429 + ABZR87_RS17035 0.65 -0.2 173,430 - ABZR87_RS17035 0.65 -0.7 173,430 - ABZR87_RS17035 0.65 +0.6 173,430 - ABZR87_RS17035 0.65 +0.4 173,430 - ABZR87_RS17035 0.65 -0.5 173,430 - ABZR87_RS17035 0.65 -0.5 173,430 - ABZR87_RS17035 0.65 -1.0 173,546 + ABZR87_RS17035 0.78 +0.2 173,547 - ABZR87_RS17035 0.78 -1.1 173,547 - ABZR87_RS17035 0.78 -0.8 173,547 - ABZR87_RS17035 0.78 -0.9 173,552 + ABZR87_RS17035 0.79 -0.5 173,552 + ABZR87_RS17035 0.79 -0.2 173,552 + ABZR87_RS17035 0.79 +0.1 173,552 + ABZR87_RS17035 0.79 -0.0 173,552 + ABZR87_RS17035 0.79 -0.3 173,552 + ABZR87_RS17035 0.79 -1.0 173,553 - ABZR87_RS17035 0.79 +2.8 173,553 - ABZR87_RS17035 0.79 +1.0 173,553 - ABZR87_RS17035 0.79 -0.1 173,553 - ABZR87_RS17035 0.79 +0.5 173,553 - ABZR87_RS17035 0.79 -0.2 173,631 - ABZR87_RS17035 0.88 +0.6 173,828 + +0.5 173,828 + +0.7 173,828 + +1.0 173,828 + +0.2 173,828 + -0.8 173,829 - +0.9 173,830 + +0.3 173,830 + -0.4 173,830 + +0.3 173,831 - +0.5 173,831 - -0.0 173,831 - +0.3 173,831 - -0.2 174,164 + +0.0 174,164 + +0.5 174,164 + +0.9 174,164 + +0.4 174,165 - +0.0 174,165 - -1.9 174,165 - -0.5 174,326 - ABZR87_RS17040 0.30 -0.5 174,326 - ABZR87_RS17040 0.30 +0.9 174,358 + ABZR87_RS17040 0.38 -0.9 174,358 + ABZR87_RS17040 0.38 +0.4 174,359 - ABZR87_RS17040 0.38 -0.2 174,410 - ABZR87_RS17040 0.49 +0.2 174,410 - ABZR87_RS17040 0.49 +0.7 174,410 - ABZR87_RS17040 0.49 -0.4 174,410 - ABZR87_RS17040 0.49 -1.0 174,410 - ABZR87_RS17040 0.49 +1.2 174,469 + ABZR87_RS17040 0.62 -1.0 174,469 + ABZR87_RS17040 0.62 +0.6 174,469 + ABZR87_RS17040 0.62 +0.5 174,469 + ABZR87_RS17040 0.62 +0.6 174,469 + ABZR87_RS17040 0.62 -0.0 174,470 - ABZR87_RS17040 0.62 +0.3 174,470 - ABZR87_RS17040 0.62 +0.2 174,470 - ABZR87_RS17040 0.62 -0.8 174,470 - ABZR87_RS17040 0.62 +0.1 174,589 + ABZR87_RS17040 0.88 +0.0 174,589 + ABZR87_RS17040 0.88 +0.5 174,590 - ABZR87_RS17040 0.88 +0.0
Or see this region's nucleotide sequence