Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09990 and ABZR87_RS09995 are separated by 10 nucleotides ABZR87_RS09995 and ABZR87_RS10000 are separated by 34 nucleotides ABZR87_RS10000 and ABZR87_RS10005 are separated by 69 nucleotides ABZR87_RS10005 and ABZR87_RS10010 are separated by 52 nucleotides ABZR87_RS10010 and ABZR87_RS10015 are separated by 31 nucleotides ABZR87_RS10015 and ABZR87_RS10020 are separated by 82 nucleotides
ABZR87_RS09990: ABZR87_RS09990 - iron-sulfur cluster assembly protein IscA, at 2,123,508 to 2,123,828
_RS09990
ABZR87_RS09995: ABZR87_RS09995 - DUF3565 domain-containing protein, at 2,123,839 to 2,124,039
_RS09995
ABZR87_RS10000: ABZR87_RS10000 - Fe-S protein assembly co-chaperone HscB, at 2,124,074 to 2,124,613
_RS10000
ABZR87_RS10005: ABZR87_RS10005 - Fe-S protein assembly chaperone HscA, at 2,124,683 to 2,126,548
_RS10005
ABZR87_RS10010: ABZR87_RS10010 - ISC system 2Fe-2S type ferredoxin, at 2,126,601 to 2,126,939
_RS10010
ABZR87_RS10015: ABZR87_RS10015 - Fe-S cluster assembly protein IscX, at 2,126,971 to 2,127,165
_RS10015
ABZR87_RS10020: ABZR87_RS10020 - glycine zipper 2TM domain-containing protein, at 2,127,248 to 2,127,991
_RS10020
Position (kb)
2124
2125
2126
2127 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2124.037 kb on + strand at 2124.611 kb on + strand at 2124.611 kb on + strand at 2124.611 kb on + strand at 2126.530 kb on + strand at 2126.583 kb on + strand at 2126.583 kb on + strand at 2127.011 kb on - strand, within ABZR87_RS10015 at 2127.019 kb on + strand, within ABZR87_RS10015 at 2127.019 kb on + strand, within ABZR87_RS10015 at 2127.020 kb on - strand, within ABZR87_RS10015 at 2127.020 kb on - strand, within ABZR87_RS10015 at 2127.164 kb on - strand at 2127.171 kb on + strand at 2127.171 kb on + strand at 2127.171 kb on + strand at 2127.318 kb on + strand at 2127.319 kb on - strand at 2127.337 kb on + strand, within ABZR87_RS10020 at 2127.338 kb on - strand, within ABZR87_RS10020 at 2127.388 kb on - strand, within ABZR87_RS10020 at 2127.388 kb on - strand, within ABZR87_RS10020 at 2127.388 kb on - strand, within ABZR87_RS10020 at 2127.423 kb on - strand, within ABZR87_RS10020 at 2127.448 kb on + strand, within ABZR87_RS10020
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 2,124,037 + -0.1 2,124,611 + +0.2 2,124,611 + +0.3 2,124,611 + +0.2 2,126,530 + +0.6 2,126,583 + +1.1 2,126,583 + +0.2 2,127,011 - ABZR87_RS10015 0.21 -1.4 2,127,019 + ABZR87_RS10015 0.25 -0.3 2,127,019 + ABZR87_RS10015 0.25 +0.8 2,127,020 - ABZR87_RS10015 0.25 +1.0 2,127,020 - ABZR87_RS10015 0.25 +1.5 2,127,164 - -0.7 2,127,171 + -0.5 2,127,171 + +0.5 2,127,171 + -1.1 2,127,318 + -1.3 2,127,319 - -2.1 2,127,337 + ABZR87_RS10020 0.12 +2.0 2,127,338 - ABZR87_RS10020 0.12 -1.1 2,127,388 - ABZR87_RS10020 0.19 -0.6 2,127,388 - ABZR87_RS10020 0.19 +0.1 2,127,388 - ABZR87_RS10020 0.19 -0.1 2,127,423 - ABZR87_RS10020 0.24 -0.3 2,127,448 + ABZR87_RS10020 0.27 -0.0
Or see this region's nucleotide sequence