Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS20040 and ABZR87_RS20045 are separated by 30 nucleotides ABZR87_RS20045 and ABZR87_RS20050 are separated by 19 nucleotides ABZR87_RS20050 and ABZR87_RS20055 are separated by 51 nucleotides ABZR87_RS20055 and ABZR87_RS20060 are separated by 38 nucleotides ABZR87_RS20060 and ABZR87_RS20065 are separated by 38 nucleotides
ABZR87_RS20040: ABZR87_RS20040 - BON domain-containing protein, at 874,228 to 874,875
_RS20040
ABZR87_RS20045: ABZR87_RS20045 - TraR/DksA family transcriptional regulator, at 874,906 to 875,268
_RS20045
ABZR87_RS20050: ABZR87_RS20050 - flavodoxin family protein, at 875,288 to 875,818
_RS20050
ABZR87_RS20055: ABZR87_RS20055 - BON domain-containing protein, at 875,870 to 876,523
_RS20055
ABZR87_RS20060: ABZR87_RS20060 - universal stress protein, at 876,562 to 877,401
_RS20060
ABZR87_RS20065: ABZR87_RS20065 - universal stress protein, at 877,440 to 877,940
_RS20065
Position (kb) 875
876
877 Strain fitness (log2 ratio) -2
-1
0
1
2 at 874.876 kb on - strand at 874.894 kb on - strand at 874.894 kb on - strand at 874.894 kb on - strand at 875.018 kb on + strand, within ABZR87_RS20045 at 875.018 kb on + strand, within ABZR87_RS20045 at 875.018 kb on + strand, within ABZR87_RS20045 at 875.018 kb on + strand, within ABZR87_RS20045 at 875.018 kb on + strand, within ABZR87_RS20045 at 875.019 kb on - strand, within ABZR87_RS20045 at 875.019 kb on - strand, within ABZR87_RS20045 at 875.019 kb on - strand, within ABZR87_RS20045 at 875.034 kb on + strand, within ABZR87_RS20045 at 875.034 kb on + strand, within ABZR87_RS20045 at 875.034 kb on + strand, within ABZR87_RS20045 at 875.035 kb on - strand, within ABZR87_RS20045 at 875.035 kb on - strand, within ABZR87_RS20045 at 875.035 kb on - strand, within ABZR87_RS20045 at 875.035 kb on - strand, within ABZR87_RS20045 at 875.355 kb on - strand, within ABZR87_RS20050 at 875.365 kb on + strand, within ABZR87_RS20050 at 875.366 kb on - strand, within ABZR87_RS20050 at 875.558 kb on - strand, within ABZR87_RS20050 at 875.558 kb on - strand, within ABZR87_RS20050 at 875.594 kb on + strand, within ABZR87_RS20050 at 875.634 kb on + strand, within ABZR87_RS20050 at 875.635 kb on - strand, within ABZR87_RS20050 at 875.635 kb on - strand, within ABZR87_RS20050 at 875.635 kb on - strand, within ABZR87_RS20050 at 875.635 kb on - strand, within ABZR87_RS20050 at 875.639 kb on - strand, within ABZR87_RS20050 at 875.660 kb on + strand, within ABZR87_RS20050 at 875.660 kb on + strand, within ABZR87_RS20050 at 875.793 kb on + strand at 875.793 kb on + strand at 875.796 kb on + strand at 875.796 kb on + strand at 875.796 kb on + strand at 875.796 kb on + strand at 875.796 kb on + strand at 875.797 kb on - strand at 875.797 kb on - strand at 875.823 kb on + strand at 875.824 kb on - strand at 875.824 kb on - strand at 875.871 kb on + strand at 875.872 kb on - strand at 875.872 kb on - strand at 875.872 kb on - strand at 875.973 kb on + strand, within ABZR87_RS20055 at 875.973 kb on + strand, within ABZR87_RS20055 at 875.974 kb on - strand, within ABZR87_RS20055 at 876.242 kb on + strand, within ABZR87_RS20055 at 876.243 kb on - strand, within ABZR87_RS20055 at 876.243 kb on - strand, within ABZR87_RS20055 at 876.243 kb on - strand, within ABZR87_RS20055 at 876.243 kb on - strand, within ABZR87_RS20055 at 876.243 kb on - strand, within ABZR87_RS20055 at 876.397 kb on + strand, within ABZR87_RS20055 at 876.397 kb on + strand, within ABZR87_RS20055 at 876.825 kb on + strand, within ABZR87_RS20060 at 876.825 kb on + strand, within ABZR87_RS20060 at 876.825 kb on + strand, within ABZR87_RS20060 at 876.826 kb on - strand, within ABZR87_RS20060 at 876.968 kb on + strand, within ABZR87_RS20060 at 876.968 kb on + strand, within ABZR87_RS20060 at 876.969 kb on - strand, within ABZR87_RS20060 at 877.186 kb on + strand, within ABZR87_RS20060 at 877.186 kb on + strand, within ABZR87_RS20060 at 877.186 kb on + strand, within ABZR87_RS20060 at 877.187 kb on - strand, within ABZR87_RS20060 at 877.187 kb on - strand, within ABZR87_RS20060 at 877.187 kb on - strand, within ABZR87_RS20060 at 877.233 kb on - strand, within ABZR87_RS20060 at 877.233 kb on - strand, within ABZR87_RS20060 at 877.256 kb on + strand, within ABZR87_RS20060 at 877.256 kb on + strand, within ABZR87_RS20060 at 877.257 kb on - strand, within ABZR87_RS20060 at 877.257 kb on - strand, within ABZR87_RS20060 at 877.257 kb on - strand, within ABZR87_RS20060 at 877.289 kb on + strand, within ABZR87_RS20060 at 877.289 kb on + strand, within ABZR87_RS20060 at 877.289 kb on + strand, within ABZR87_RS20060 at 877.289 kb on + strand, within ABZR87_RS20060 at 877.289 kb on + strand, within ABZR87_RS20060 at 877.290 kb on - strand, within ABZR87_RS20060 at 877.290 kb on - strand, within ABZR87_RS20060 at 877.325 kb on + strand at 877.325 kb on + strand at 877.326 kb on - strand at 877.326 kb on - strand at 877.394 kb on + strand at 877.441 kb on + strand at 877.442 kb on - strand at 877.442 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 874,876 - +0.6 874,894 - +0.6 874,894 - -1.1 874,894 - -0.5 875,018 + ABZR87_RS20045 0.31 -0.5 875,018 + ABZR87_RS20045 0.31 +1.0 875,018 + ABZR87_RS20045 0.31 +0.4 875,018 + ABZR87_RS20045 0.31 +1.2 875,018 + ABZR87_RS20045 0.31 -0.2 875,019 - ABZR87_RS20045 0.31 -1.1 875,019 - ABZR87_RS20045 0.31 -0.2 875,019 - ABZR87_RS20045 0.31 -0.5 875,034 + ABZR87_RS20045 0.35 +0.2 875,034 + ABZR87_RS20045 0.35 +0.1 875,034 + ABZR87_RS20045 0.35 -1.3 875,035 - ABZR87_RS20045 0.36 +1.6 875,035 - ABZR87_RS20045 0.36 +2.1 875,035 - ABZR87_RS20045 0.36 -0.5 875,035 - ABZR87_RS20045 0.36 +1.6 875,355 - ABZR87_RS20050 0.13 +0.3 875,365 + ABZR87_RS20050 0.15 -0.2 875,366 - ABZR87_RS20050 0.15 +0.5 875,558 - ABZR87_RS20050 0.51 -0.1 875,558 - ABZR87_RS20050 0.51 +0.8 875,594 + ABZR87_RS20050 0.58 -0.7 875,634 + ABZR87_RS20050 0.65 -1.0 875,635 - ABZR87_RS20050 0.65 -1.0 875,635 - ABZR87_RS20050 0.65 +0.7 875,635 - ABZR87_RS20050 0.65 -1.2 875,635 - ABZR87_RS20050 0.65 +2.3 875,639 - ABZR87_RS20050 0.66 -2.0 875,660 + ABZR87_RS20050 0.70 -0.5 875,660 + ABZR87_RS20050 0.70 +0.0 875,793 + -1.0 875,793 + -1.1 875,796 + -1.3 875,796 + +0.1 875,796 + -1.2 875,796 + +1.2 875,796 + -1.1 875,797 - -0.1 875,797 - -0.4 875,823 + +0.0 875,824 - +0.8 875,824 - -0.4 875,871 + -0.3 875,872 - -0.4 875,872 - -1.3 875,872 - +0.4 875,973 + ABZR87_RS20055 0.16 +0.7 875,973 + ABZR87_RS20055 0.16 -0.6 875,974 - ABZR87_RS20055 0.16 +1.5 876,242 + ABZR87_RS20055 0.57 +0.2 876,243 - ABZR87_RS20055 0.57 +0.2 876,243 - ABZR87_RS20055 0.57 -0.3 876,243 - ABZR87_RS20055 0.57 +0.5 876,243 - ABZR87_RS20055 0.57 +0.1 876,243 - ABZR87_RS20055 0.57 +0.0 876,397 + ABZR87_RS20055 0.81 +2.7 876,397 + ABZR87_RS20055 0.81 +0.5 876,825 + ABZR87_RS20060 0.31 -0.2 876,825 + ABZR87_RS20060 0.31 +0.7 876,825 + ABZR87_RS20060 0.31 -0.1 876,826 - ABZR87_RS20060 0.31 +0.0 876,968 + ABZR87_RS20060 0.48 -0.7 876,968 + ABZR87_RS20060 0.48 -0.1 876,969 - ABZR87_RS20060 0.48 +1.1 877,186 + ABZR87_RS20060 0.74 -0.0 877,186 + ABZR87_RS20060 0.74 -1.0 877,186 + ABZR87_RS20060 0.74 +0.1 877,187 - ABZR87_RS20060 0.74 +0.7 877,187 - ABZR87_RS20060 0.74 +0.6 877,187 - ABZR87_RS20060 0.74 -1.0 877,233 - ABZR87_RS20060 0.80 -0.2 877,233 - ABZR87_RS20060 0.80 -0.1 877,256 + ABZR87_RS20060 0.83 -1.1 877,256 + ABZR87_RS20060 0.83 +0.6 877,257 - ABZR87_RS20060 0.83 -0.1 877,257 - ABZR87_RS20060 0.83 +0.4 877,257 - ABZR87_RS20060 0.83 +0.6 877,289 + ABZR87_RS20060 0.87 -0.1 877,289 + ABZR87_RS20060 0.87 -1.4 877,289 + ABZR87_RS20060 0.87 +0.0 877,289 + ABZR87_RS20060 0.87 +0.5 877,289 + ABZR87_RS20060 0.87 +0.2 877,290 - ABZR87_RS20060 0.87 +0.6 877,290 - ABZR87_RS20060 0.87 -0.0 877,325 + +0.9 877,325 + +0.7 877,326 - +0.6 877,326 - -0.9 877,394 + -0.0 877,441 + +1.2 877,442 - +0.7 877,442 - +0.2
Or see this region's nucleotide sequence