Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17260 and ABZR87_RS17265 are separated by 96 nucleotides ABZR87_RS17265 and ABZR87_RS17270 are separated by 9 nucleotides ABZR87_RS17270 and ABZR87_RS17275 are separated by 106 nucleotides ABZR87_RS17275 and ABZR87_RS17280 overlap by 4 nucleotides
ABZR87_RS17260: ABZR87_RS17260 - ferric iron uptake transcriptional regulator, at 230,459 to 230,914
_RS17260
ABZR87_RS17265: ABZR87_RS17265 - hypothetical protein, at 231,011 to 231,262
_RS17265
ABZR87_RS17270: ABZR87_RS17270 - hypothetical protein, at 231,272 to 231,577
_RS17270
ABZR87_RS17275: ABZR87_RS17275 - DUF6587 family protein, at 231,684 to 232,004
_RS17275
ABZR87_RS17280: ABZR87_RS17280 - ferrous iron transport protein B, at 232,001 to 233,866
_RS17280
Position (kb) 231
232
233 Strain fitness (log2 ratio) -1
0
1
2 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.699 kb on + strand, within ABZR87_RS17260 at 230.700 kb on - strand, within ABZR87_RS17260 at 230.700 kb on - strand, within ABZR87_RS17260 at 230.849 kb on + strand, within ABZR87_RS17260 at 230.850 kb on - strand, within ABZR87_RS17260 at 230.925 kb on + strand at 230.926 kb on - strand at 230.926 kb on - strand at 230.941 kb on + strand at 230.942 kb on - strand at 230.995 kb on + strand at 231.239 kb on + strand at 231.239 kb on + strand at 231.239 kb on + strand at 231.239 kb on + strand at 231.239 kb on + strand at 231.240 kb on - strand at 231.240 kb on - strand at 231.273 kb on + strand at 231.273 kb on + strand at 231.274 kb on - strand at 231.426 kb on - strand, within ABZR87_RS17270 at 231.609 kb on + strand at 231.610 kb on - strand at 231.610 kb on - strand at 231.685 kb on + strand at 231.686 kb on - strand at 231.686 kb on - strand at 232.027 kb on - strand at 232.027 kb on - strand at 232.027 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 230,699 + ABZR87_RS17260 0.53 +0.2 230,699 + ABZR87_RS17260 0.53 +0.1 230,699 + ABZR87_RS17260 0.53 +0.5 230,699 + ABZR87_RS17260 0.53 +1.4 230,699 + ABZR87_RS17260 0.53 -1.1 230,699 + ABZR87_RS17260 0.53 +1.0 230,699 + ABZR87_RS17260 0.53 +1.4 230,700 - ABZR87_RS17260 0.53 +0.7 230,700 - ABZR87_RS17260 0.53 -0.1 230,849 + ABZR87_RS17260 0.86 -0.0 230,850 - ABZR87_RS17260 0.86 -0.7 230,925 + +0.1 230,926 - +0.0 230,926 - -0.4 230,941 + -0.5 230,942 - -0.1 230,995 + +0.2 231,239 + +0.5 231,239 + +1.9 231,239 + +0.1 231,239 + -0.3 231,239 + +0.8 231,240 - -0.1 231,240 - +1.4 231,273 + +0.9 231,273 + -0.8 231,274 - -0.6 231,426 - ABZR87_RS17270 0.50 +0.6 231,609 + -0.1 231,610 - -0.0 231,610 - -0.7 231,685 + +0.7 231,686 - +0.2 231,686 - +0.1 232,027 - -0.4 232,027 - +1.9 232,027 - +0.5
Or see this region's nucleotide sequence