Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16370 and ABZR87_RS16375 are separated by 48 nucleotides ABZR87_RS16375 and ABZR87_RS16380 are separated by 84 nucleotides ABZR87_RS16380 and ABZR87_RS16385 are separated by 123 nucleotides
ABZR87_RS16370: ABZR87_RS16370 - TonB-dependent siderophore receptor, at 24,298 to 26,526
_RS16370
ABZR87_RS16375: ABZR87_RS16375 - Fe2+-dependent dioxygenase, at 26,575 to 27,261
_RS16375
ABZR87_RS16380: ABZR87_RS16380 - hypothetical protein, at 27,346 to 27,492
_RS16380
ABZR87_RS16385: ABZR87_RS16385 - PEP/pyruvate-binding domain-containing protein, at 27,616 to 30,144
_RS16385
Position (kb) 27
28 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 26.396 kb on - strand at 26.396 kb on - strand at 26.437 kb on + strand at 26.437 kb on + strand at 26.438 kb on - strand at 26.438 kb on - strand at 26.438 kb on - strand at 26.438 kb on - strand at 26.440 kb on + strand at 26.440 kb on + strand at 26.440 kb on + strand at 26.440 kb on + strand at 26.440 kb on + strand at 26.440 kb on + strand at 26.440 kb on + strand at 26.441 kb on - strand at 26.441 kb on - strand at 26.441 kb on - strand at 26.441 kb on - strand at 26.441 kb on - strand at 26.441 kb on - strand at 26.515 kb on + strand at 26.515 kb on + strand at 26.515 kb on + strand at 26.516 kb on - strand at 26.516 kb on - strand at 26.516 kb on - strand at 26.516 kb on - strand at 26.524 kb on + strand at 26.524 kb on + strand at 26.524 kb on + strand at 26.525 kb on - strand at 26.525 kb on - strand at 26.525 kb on - strand at 26.525 kb on - strand at 26.525 kb on - strand at 26.525 kb on - strand at 26.525 kb on - strand at 26.683 kb on + strand, within ABZR87_RS16375 at 26.684 kb on - strand, within ABZR87_RS16375 at 26.818 kb on + strand, within ABZR87_RS16375 at 26.818 kb on + strand, within ABZR87_RS16375 at 26.819 kb on - strand, within ABZR87_RS16375 at 26.916 kb on + strand, within ABZR87_RS16375 at 26.959 kb on + strand, within ABZR87_RS16375 at 26.960 kb on - strand, within ABZR87_RS16375 at 26.960 kb on - strand, within ABZR87_RS16375 at 26.960 kb on - strand, within ABZR87_RS16375 at 26.992 kb on + strand, within ABZR87_RS16375 at 26.992 kb on + strand, within ABZR87_RS16375 at 26.992 kb on + strand, within ABZR87_RS16375 at 26.992 kb on + strand, within ABZR87_RS16375 at 26.992 kb on + strand, within ABZR87_RS16375 at 26.992 kb on + strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 26.993 kb on - strand, within ABZR87_RS16375 at 27.037 kb on + strand, within ABZR87_RS16375 at 27.037 kb on + strand, within ABZR87_RS16375 at 27.038 kb on - strand, within ABZR87_RS16375 at 27.226 kb on + strand at 27.226 kb on + strand at 27.226 kb on + strand at 27.227 kb on - strand at 27.227 kb on - strand at 27.227 kb on - strand at 27.365 kb on + strand, within ABZR87_RS16380 at 27.517 kb on + strand at 27.518 kb on - strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.529 kb on + strand at 27.530 kb on - strand at 27.530 kb on - strand at 27.530 kb on - strand at 27.530 kb on - strand at 27.530 kb on - strand at 27.530 kb on - strand at 27.532 kb on + strand at 27.539 kb on + strand at 27.758 kb on + strand at 27.759 kb on - strand at 28.208 kb on + strand, within ABZR87_RS16385 at 28.208 kb on + strand, within ABZR87_RS16385 at 28.209 kb on - strand, within ABZR87_RS16385 at 28.209 kb on - strand, within ABZR87_RS16385 at 28.381 kb on + strand, within ABZR87_RS16385 at 28.381 kb on + strand, within ABZR87_RS16385 at 28.381 kb on + strand, within ABZR87_RS16385 at 28.381 kb on + strand, within ABZR87_RS16385 at 28.381 kb on + strand, within ABZR87_RS16385 at 28.382 kb on - strand, within ABZR87_RS16385 at 28.382 kb on - strand, within ABZR87_RS16385 at 28.382 kb on - strand, within ABZR87_RS16385 at 28.382 kb on - strand, within ABZR87_RS16385 at 28.397 kb on + strand, within ABZR87_RS16385 at 28.398 kb on + strand, within ABZR87_RS16385 at 28.433 kb on + strand, within ABZR87_RS16385 at 28.433 kb on + strand, within ABZR87_RS16385 at 28.434 kb on - strand, within ABZR87_RS16385 at 28.434 kb on - strand, within ABZR87_RS16385 at 28.434 kb on - strand, within ABZR87_RS16385
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 26,396 - +0.8 26,396 - +0.7 26,437 + +0.1 26,437 + +1.6 26,438 - +1.0 26,438 - -1.7 26,438 - +0.1 26,438 - +0.6 26,440 + -1.8 26,440 + +0.0 26,440 + -1.3 26,440 + +3.0 26,440 + +0.3 26,440 + -0.1 26,440 + +0.6 26,441 - -0.1 26,441 - +0.8 26,441 - -0.2 26,441 - -0.8 26,441 - +0.1 26,441 - +0.8 26,515 + +0.4 26,515 + +0.8 26,515 + +0.4 26,516 - -0.4 26,516 - -0.4 26,516 - -0.4 26,516 - +0.6 26,524 + -0.0 26,524 + +0.8 26,524 + -0.7 26,525 - +0.6 26,525 - -1.7 26,525 - -0.7 26,525 - +0.3 26,525 - +0.3 26,525 - +0.4 26,525 - +0.5 26,683 + ABZR87_RS16375 0.16 -0.8 26,684 - ABZR87_RS16375 0.16 +0.6 26,818 + ABZR87_RS16375 0.35 +0.3 26,818 + ABZR87_RS16375 0.35 +0.1 26,819 - ABZR87_RS16375 0.36 -1.2 26,916 + ABZR87_RS16375 0.50 +0.1 26,959 + ABZR87_RS16375 0.56 +0.5 26,960 - ABZR87_RS16375 0.56 -0.2 26,960 - ABZR87_RS16375 0.56 -0.0 26,960 - ABZR87_RS16375 0.56 +0.0 26,992 + ABZR87_RS16375 0.61 +0.5 26,992 + ABZR87_RS16375 0.61 +0.5 26,992 + ABZR87_RS16375 0.61 -1.1 26,992 + ABZR87_RS16375 0.61 +0.1 26,992 + ABZR87_RS16375 0.61 +0.2 26,992 + ABZR87_RS16375 0.61 -0.4 26,993 - ABZR87_RS16375 0.61 -0.3 26,993 - ABZR87_RS16375 0.61 +0.2 26,993 - ABZR87_RS16375 0.61 -0.1 26,993 - ABZR87_RS16375 0.61 +0.3 26,993 - ABZR87_RS16375 0.61 -1.2 26,993 - ABZR87_RS16375 0.61 -0.9 26,993 - ABZR87_RS16375 0.61 -1.0 27,037 + ABZR87_RS16375 0.67 -1.0 27,037 + ABZR87_RS16375 0.67 -0.3 27,038 - ABZR87_RS16375 0.67 -0.5 27,226 + -1.2 27,226 + +0.5 27,226 + +0.1 27,227 - +0.4 27,227 - +0.6 27,227 - +0.2 27,365 + ABZR87_RS16380 0.13 +1.4 27,517 + -0.1 27,518 - +0.6 27,529 + -0.5 27,529 + -1.6 27,529 + -0.6 27,529 + -0.6 27,529 + -0.7 27,529 + -0.5 27,529 + +0.7 27,529 + +0.3 27,529 + +0.8 27,529 + +0.6 27,529 + -0.2 27,530 - +0.4 27,530 - +0.7 27,530 - -1.1 27,530 - +0.0 27,530 - -0.9 27,530 - +0.6 27,532 + +1.5 27,539 + +0.8 27,758 + -0.8 27,759 - -0.5 28,208 + ABZR87_RS16385 0.23 -0.1 28,208 + ABZR87_RS16385 0.23 +0.7 28,209 - ABZR87_RS16385 0.23 +0.9 28,209 - ABZR87_RS16385 0.23 +0.1 28,381 + ABZR87_RS16385 0.30 +0.3 28,381 + ABZR87_RS16385 0.30 -0.2 28,381 + ABZR87_RS16385 0.30 -1.7 28,381 + ABZR87_RS16385 0.30 -1.3 28,381 + ABZR87_RS16385 0.30 -0.5 28,382 - ABZR87_RS16385 0.30 -0.8 28,382 - ABZR87_RS16385 0.30 -0.8 28,382 - ABZR87_RS16385 0.30 -0.2 28,382 - ABZR87_RS16385 0.30 -0.7 28,397 + ABZR87_RS16385 0.31 -0.1 28,398 + ABZR87_RS16385 0.31 +0.2 28,433 + ABZR87_RS16385 0.32 -0.2 28,433 + ABZR87_RS16385 0.32 -2.2 28,434 - ABZR87_RS16385 0.32 +1.8 28,434 - ABZR87_RS16385 0.32 -1.3 28,434 - ABZR87_RS16385 0.32 -0.1
Or see this region's nucleotide sequence