Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13700 and ABZR87_RS13705 are separated by 71 nucleotides ABZR87_RS13705 and ABZR87_RS13710 are separated by 78 nucleotides ABZR87_RS13710 and ABZR87_RS13715 are separated by 64 nucleotides
ABZR87_RS13700: ABZR87_RS13700 - MerR family transcriptional regulator, at 2,890,793 to 2,891,224
_RS13700
ABZR87_RS13705: ABZR87_RS13705 - integration host factor subunit alpha, at 2,891,296 to 2,891,712
_RS13705
ABZR87_RS13710: ABZR87_RS13710 - phenylalanine--tRNA ligase subunit beta, at 2,891,791 to 2,894,220
_RS13710
ABZR87_RS13715: ABZR87_RS13715 - phenylalanine--tRNA ligase subunit alpha, at 2,894,285 to 2,895,319
_RS13715
Position (kb)
2891
2892
2893
2894
2895 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2890.794 kb on + strand at 2890.794 kb on + strand at 2890.795 kb on - strand at 2890.795 kb on - strand at 2891.001 kb on + strand, within ABZR87_RS13700 at 2891.002 kb on - strand, within ABZR87_RS13700 at 2891.017 kb on + strand, within ABZR87_RS13700 at 2891.017 kb on + strand, within ABZR87_RS13700 at 2891.017 kb on + strand, within ABZR87_RS13700 at 2891.049 kb on + strand, within ABZR87_RS13700 at 2891.049 kb on + strand, within ABZR87_RS13700 at 2891.050 kb on - strand, within ABZR87_RS13700 at 2891.050 kb on - strand, within ABZR87_RS13700 at 2891.050 kb on - strand, within ABZR87_RS13700 at 2891.050 kb on - strand, within ABZR87_RS13700 at 2891.050 kb on - strand, within ABZR87_RS13700 at 2891.050 kb on - strand, within ABZR87_RS13700 at 2891.052 kb on + strand, within ABZR87_RS13700 at 2891.053 kb on - strand, within ABZR87_RS13700 at 2891.092 kb on + strand, within ABZR87_RS13700 at 2891.138 kb on + strand, within ABZR87_RS13700 at 2891.138 kb on + strand, within ABZR87_RS13700 at 2891.138 kb on + strand, within ABZR87_RS13700 at 2891.138 kb on + strand, within ABZR87_RS13700 at 2891.138 kb on + strand, within ABZR87_RS13700 at 2891.139 kb on - strand, within ABZR87_RS13700 at 2891.166 kb on + strand, within ABZR87_RS13700 at 2891.224 kb on + strand at 2891.238 kb on - strand at 2891.297 kb on + strand at 2891.298 kb on - strand at 2891.298 kb on - strand at 2891.457 kb on + strand, within ABZR87_RS13705 at 2891.533 kb on - strand, within ABZR87_RS13705 at 2891.533 kb on - strand, within ABZR87_RS13705 at 2891.724 kb on - strand at 2891.728 kb on + strand at 2891.728 kb on + strand at 2891.729 kb on - strand at 2894.287 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 2,890,794 + +0.7 2,890,794 + -0.0 2,890,795 - -1.0 2,890,795 - +0.3 2,891,001 + ABZR87_RS13700 0.48 -0.4 2,891,002 - ABZR87_RS13700 0.48 +0.8 2,891,017 + ABZR87_RS13700 0.52 -0.7 2,891,017 + ABZR87_RS13700 0.52 -0.6 2,891,017 + ABZR87_RS13700 0.52 +0.2 2,891,049 + ABZR87_RS13700 0.59 -0.2 2,891,049 + ABZR87_RS13700 0.59 -0.8 2,891,050 - ABZR87_RS13700 0.59 -0.4 2,891,050 - ABZR87_RS13700 0.59 +0.5 2,891,050 - ABZR87_RS13700 0.59 -0.5 2,891,050 - ABZR87_RS13700 0.59 +0.2 2,891,050 - ABZR87_RS13700 0.59 +0.4 2,891,050 - ABZR87_RS13700 0.59 -0.6 2,891,052 + ABZR87_RS13700 0.60 -0.1 2,891,053 - ABZR87_RS13700 0.60 +0.2 2,891,092 + ABZR87_RS13700 0.69 +0.3 2,891,138 + ABZR87_RS13700 0.80 -0.6 2,891,138 + ABZR87_RS13700 0.80 +0.8 2,891,138 + ABZR87_RS13700 0.80 +0.4 2,891,138 + ABZR87_RS13700 0.80 -3.1 2,891,138 + ABZR87_RS13700 0.80 -0.7 2,891,139 - ABZR87_RS13700 0.80 +0.4 2,891,166 + ABZR87_RS13700 0.86 +0.7 2,891,224 + +0.3 2,891,238 - -2.1 2,891,297 + +0.7 2,891,298 - -0.9 2,891,298 - +1.3 2,891,457 + ABZR87_RS13705 0.39 +3.6 2,891,533 - ABZR87_RS13705 0.57 -0.0 2,891,533 - ABZR87_RS13705 0.57 +0.1 2,891,724 - +0.2 2,891,728 + +0.3 2,891,728 + -2.2 2,891,729 - +0.8 2,894,287 - -1.5
Or see this region's nucleotide sequence