Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11790 and ABZR87_RS11795 are separated by 10 nucleotides ABZR87_RS11795 and ABZR87_RS11800 overlap by 4 nucleotides ABZR87_RS11800 and ABZR87_RS11805 are separated by 68 nucleotides
ABZR87_RS11790: ABZR87_RS11790 - cell division protein ZipA C-terminal FtsZ-binding domain-containing protein, at 2,500,687 to 2,501,901
_RS11790
ABZR87_RS11795: ABZR87_RS11795 - NAD-dependent DNA ligase LigA, at 2,501,912 to 2,504,353
_RS11795
ABZR87_RS11800: ABZR87_RS11800 - peptide deformylase, at 2,504,350 to 2,504,883
_RS11800
ABZR87_RS11805: ABZR87_RS11805 - alpha/beta fold hydrolase, at 2,504,952 to 2,506,073
_RS11805
Position (kb)
2501
2502
2503
2504
2505 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2501.251 kb on + strand, within ABZR87_RS11790 at 2501.441 kb on + strand, within ABZR87_RS11790 at 2501.442 kb on - strand, within ABZR87_RS11790 at 2501.491 kb on + strand, within ABZR87_RS11790 at 2501.731 kb on + strand, within ABZR87_RS11790 at 2501.833 kb on + strand at 2504.683 kb on + strand, within ABZR87_RS11800 at 2504.684 kb on - strand, within ABZR87_RS11800 at 2504.684 kb on - strand, within ABZR87_RS11800 at 2504.699 kb on - strand, within ABZR87_RS11800 at 2504.699 kb on - strand, within ABZR87_RS11800 at 2504.699 kb on - strand, within ABZR87_RS11800 at 2504.736 kb on + strand, within ABZR87_RS11800 at 2504.736 kb on + strand, within ABZR87_RS11800 at 2504.736 kb on + strand, within ABZR87_RS11800 at 2504.737 kb on - strand, within ABZR87_RS11800 at 2504.921 kb on - strand at 2504.952 kb on - strand at 2504.952 kb on - strand at 2505.119 kb on + strand, within ABZR87_RS11805 at 2505.136 kb on - strand, within ABZR87_RS11805 at 2505.150 kb on + strand, within ABZR87_RS11805 at 2505.151 kb on - strand, within ABZR87_RS11805 at 2505.241 kb on - strand, within ABZR87_RS11805 at 2505.241 kb on - strand, within ABZR87_RS11805 at 2505.241 kb on - strand, within ABZR87_RS11805 at 2505.241 kb on - strand, within ABZR87_RS11805 at 2505.241 kb on - strand, within ABZR87_RS11805
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 2,501,251 + ABZR87_RS11790 0.46 +1.2 2,501,441 + ABZR87_RS11790 0.62 +0.7 2,501,442 - ABZR87_RS11790 0.62 +1.8 2,501,491 + ABZR87_RS11790 0.66 +0.4 2,501,731 + ABZR87_RS11790 0.86 +0.5 2,501,833 + -1.5 2,504,683 + ABZR87_RS11800 0.62 +0.0 2,504,684 - ABZR87_RS11800 0.63 -0.3 2,504,684 - ABZR87_RS11800 0.63 +1.1 2,504,699 - ABZR87_RS11800 0.65 +1.1 2,504,699 - ABZR87_RS11800 0.65 +0.2 2,504,699 - ABZR87_RS11800 0.65 -1.3 2,504,736 + ABZR87_RS11800 0.72 +0.5 2,504,736 + ABZR87_RS11800 0.72 +0.7 2,504,736 + ABZR87_RS11800 0.72 -0.6 2,504,737 - ABZR87_RS11800 0.72 +0.3 2,504,921 - +0.3 2,504,952 - -0.2 2,504,952 - -0.6 2,505,119 + ABZR87_RS11805 0.15 +2.5 2,505,136 - ABZR87_RS11805 0.16 -1.9 2,505,150 + ABZR87_RS11805 0.18 -0.1 2,505,151 - ABZR87_RS11805 0.18 -0.4 2,505,241 - ABZR87_RS11805 0.26 -0.9 2,505,241 - ABZR87_RS11805 0.26 +0.7 2,505,241 - ABZR87_RS11805 0.26 -1.2 2,505,241 - ABZR87_RS11805 0.26 -0.7 2,505,241 - ABZR87_RS11805 0.26 +0.4
Or see this region's nucleotide sequence