Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10735 and ABZR87_RS10740 are separated by 183 nucleotides ABZR87_RS10740 and ABZR87_RS10745 are separated by 203 nucleotides ABZR87_RS10745 and ABZR87_RS10750 overlap by 4 nucleotides
ABZR87_RS10735: ABZR87_RS10735 - glycosyltransferase family 39 protein, at 2,271,041 to 2,272,831
_RS10735
ABZR87_RS10740: ABZR87_RS10740 - type B 50S ribosomal protein L31, at 2,273,015 to 2,273,275
_RS10740
ABZR87_RS10745: ABZR87_RS10745 - hypothetical protein, at 2,273,479 to 2,274,036
_RS10745
ABZR87_RS10750: ABZR87_RS10750 - zinc-dependent peptidase, at 2,274,033 to 2,274,899
_RS10750
Position (kb)
2273
2274 Strain fitness (log2 ratio)
-1
0
1 at 2272.886 kb on - strand at 2272.886 kb on - strand at 2272.886 kb on - strand at 2272.909 kb on + strand at 2272.909 kb on + strand at 2272.909 kb on + strand at 2272.909 kb on + strand at 2272.909 kb on + strand at 2272.909 kb on + strand at 2272.910 kb on - strand at 2272.910 kb on - strand at 2272.910 kb on - strand at 2272.910 kb on - strand at 2272.910 kb on - strand at 2272.910 kb on - strand at 2272.962 kb on + strand at 2272.962 kb on + strand at 2272.962 kb on + strand at 2272.963 kb on - strand at 2272.963 kb on - strand at 2273.013 kb on + strand at 2273.013 kb on + strand at 2273.016 kb on + strand at 2273.016 kb on + strand at 2273.461 kb on + strand at 2273.461 kb on + strand at 2273.583 kb on + strand, within ABZR87_RS10745 at 2273.583 kb on + strand, within ABZR87_RS10745 at 2273.583 kb on + strand, within ABZR87_RS10745 at 2273.725 kb on + strand, within ABZR87_RS10745 at 2273.725 kb on + strand, within ABZR87_RS10745 at 2273.725 kb on + strand, within ABZR87_RS10745 at 2273.725 kb on + strand, within ABZR87_RS10745 at 2273.725 kb on + strand, within ABZR87_RS10745 at 2273.726 kb on - strand, within ABZR87_RS10745 at 2273.726 kb on - strand, within ABZR87_RS10745 at 2273.828 kb on - strand, within ABZR87_RS10745 at 2273.828 kb on - strand, within ABZR87_RS10745 at 2273.834 kb on + strand, within ABZR87_RS10745 at 2273.834 kb on + strand, within ABZR87_RS10745 at 2273.835 kb on - strand, within ABZR87_RS10745 at 2273.835 kb on - strand, within ABZR87_RS10745 at 2273.835 kb on - strand, within ABZR87_RS10745 at 2273.835 kb on - strand, within ABZR87_RS10745 at 2273.835 kb on - strand, within ABZR87_RS10745 at 2273.838 kb on + strand, within ABZR87_RS10745 at 2273.838 kb on + strand, within ABZR87_RS10745 at 2273.838 kb on + strand, within ABZR87_RS10745 at 2273.838 kb on + strand, within ABZR87_RS10745 at 2273.838 kb on + strand, within ABZR87_RS10745 at 2273.839 kb on - strand, within ABZR87_RS10745 at 2273.839 kb on - strand, within ABZR87_RS10745 at 2273.839 kb on - strand, within ABZR87_RS10745 at 2273.839 kb on - strand, within ABZR87_RS10745 at 2273.839 kb on - strand, within ABZR87_RS10745 at 2273.839 kb on - strand, within ABZR87_RS10745 at 2273.844 kb on + strand, within ABZR87_RS10745 at 2273.844 kb on + strand, within ABZR87_RS10745 at 2273.845 kb on - strand, within ABZR87_RS10745 at 2273.845 kb on - strand, within ABZR87_RS10745 at 2273.845 kb on - strand, within ABZR87_RS10745 at 2273.997 kb on + strand at 2274.097 kb on + strand at 2274.097 kb on + strand at 2274.097 kb on + strand at 2274.118 kb on + strand at 2274.118 kb on + strand at 2274.119 kb on - strand at 2274.212 kb on - strand, within ABZR87_RS10750 at 2274.212 kb on - strand, within ABZR87_RS10750
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 2,272,886 - -0.3 2,272,886 - -0.4 2,272,886 - +0.5 2,272,909 + -0.1 2,272,909 + -1.4 2,272,909 + -1.1 2,272,909 + -0.1 2,272,909 + +0.2 2,272,909 + +0.5 2,272,910 - -0.4 2,272,910 - +0.2 2,272,910 - +0.9 2,272,910 - +0.0 2,272,910 - +0.3 2,272,910 - -1.5 2,272,962 + +1.6 2,272,962 + -0.5 2,272,962 + -0.3 2,272,963 - +0.2 2,272,963 - -0.3 2,273,013 + +0.6 2,273,013 + -0.1 2,273,016 + +0.2 2,273,016 + +0.1 2,273,461 + +1.4 2,273,461 + -1.5 2,273,583 + ABZR87_RS10745 0.19 +0.1 2,273,583 + ABZR87_RS10745 0.19 +0.8 2,273,583 + ABZR87_RS10745 0.19 +0.1 2,273,725 + ABZR87_RS10745 0.44 -0.7 2,273,725 + ABZR87_RS10745 0.44 +0.1 2,273,725 + ABZR87_RS10745 0.44 +0.5 2,273,725 + ABZR87_RS10745 0.44 +0.2 2,273,725 + ABZR87_RS10745 0.44 -0.1 2,273,726 - ABZR87_RS10745 0.44 +0.5 2,273,726 - ABZR87_RS10745 0.44 +0.3 2,273,828 - ABZR87_RS10745 0.63 +0.6 2,273,828 - ABZR87_RS10745 0.63 +1.2 2,273,834 + ABZR87_RS10745 0.64 -0.2 2,273,834 + ABZR87_RS10745 0.64 -0.2 2,273,835 - ABZR87_RS10745 0.64 +0.5 2,273,835 - ABZR87_RS10745 0.64 -1.1 2,273,835 - ABZR87_RS10745 0.64 -0.6 2,273,835 - ABZR87_RS10745 0.64 -0.3 2,273,835 - ABZR87_RS10745 0.64 -0.6 2,273,838 + ABZR87_RS10745 0.64 +0.2 2,273,838 + ABZR87_RS10745 0.64 +0.6 2,273,838 + ABZR87_RS10745 0.64 -0.8 2,273,838 + ABZR87_RS10745 0.64 -0.6 2,273,838 + ABZR87_RS10745 0.64 -0.7 2,273,839 - ABZR87_RS10745 0.65 +0.6 2,273,839 - ABZR87_RS10745 0.65 -0.6 2,273,839 - ABZR87_RS10745 0.65 +0.4 2,273,839 - ABZR87_RS10745 0.65 -0.9 2,273,839 - ABZR87_RS10745 0.65 +1.0 2,273,839 - ABZR87_RS10745 0.65 +0.5 2,273,844 + ABZR87_RS10745 0.65 -0.4 2,273,844 + ABZR87_RS10745 0.65 -0.5 2,273,845 - ABZR87_RS10745 0.66 -1.0 2,273,845 - ABZR87_RS10745 0.66 +0.4 2,273,845 - ABZR87_RS10745 0.66 +0.5 2,273,997 + +0.6 2,274,097 + -0.6 2,274,097 + +0.6 2,274,097 + +0.1 2,274,118 + -0.3 2,274,118 + -0.1 2,274,119 - -0.4 2,274,212 - ABZR87_RS10750 0.21 -0.0 2,274,212 - ABZR87_RS10750 0.21 -1.1
Or see this region's nucleotide sequence