Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10660 and ABZR87_RS10665 are separated by 96 nucleotides ABZR87_RS10665 and ABZR87_RS10670 are separated by 149 nucleotides ABZR87_RS10670 and ABZR87_RS10675 are separated by 192 nucleotides
ABZR87_RS10660: ABZR87_RS10660 - tRNA lysidine(34) synthetase TilS, at 2,255,450 to 2,256,868
_RS10660
ABZR87_RS10665: ABZR87_RS10665 - aspartate kinase, at 2,256,965 to 2,258,215
_RS10665
ABZR87_RS10670: ABZR87_RS10670 - tRNA-Ser, at 2,258,365 to 2,258,458
_RS10670
ABZR87_RS10675: ABZR87_RS10675 - enoyl-ACP reductase FabI, at 2,258,651 to 2,259,445
_RS10675
Position (kb)
2256
2257
2258
2259 Strain fitness (log2 ratio)
-1
0
1 at 2257.711 kb on + strand, within ABZR87_RS10665 at 2258.213 kb on + strand at 2258.213 kb on + strand at 2258.214 kb on - strand at 2258.214 kb on - strand at 2258.214 kb on - strand at 2258.487 kb on + strand at 2258.487 kb on + strand at 2258.488 kb on - strand at 2258.595 kb on - strand at 2258.647 kb on + strand at 2258.647 kb on + strand at 2258.647 kb on + strand at 2258.647 kb on + strand at 2258.647 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 2,257,711 + ABZR87_RS10665 0.60 -1.7 2,258,213 + -0.1 2,258,213 + +0.7 2,258,214 - -1.6 2,258,214 - +0.4 2,258,214 - -0.2 2,258,487 + +0.2 2,258,487 + +0.1 2,258,488 - +0.9 2,258,595 - +1.4 2,258,647 + -0.2 2,258,647 + -0.1 2,258,647 + +0.1 2,258,647 + -0.9 2,258,647 + -0.6
Or see this region's nucleotide sequence