Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10135

Experiment: Disodium Glutarate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS10130 and ABZR87_RS10135 are separated by 37 nucleotidesABZR87_RS10135 and ABZR87_RS10140 are separated by 32 nucleotidesABZR87_RS10140 and ABZR87_RS10145 are separated by 14 nucleotides ABZR87_RS10130: ABZR87_RS10130 - phosphate acyltransferase PlsX, at 2,151,238 to 2,152,299 _RS10130 ABZR87_RS10135: ABZR87_RS10135 - beta-ketoacyl-ACP synthase III, at 2,152,337 to 2,153,317 _RS10135 ABZR87_RS10140: ABZR87_RS10140 - ACP S-malonyltransferase, at 2,153,350 to 2,154,279 _RS10140 ABZR87_RS10145: ABZR87_RS10145 - 3-oxoacyl-ACP reductase FabG, at 2,154,294 to 2,155,043 _RS10145 Position (kb) 2152 2153 2154Strain fitness (log2 ratio) -1 0 1at 2153.342 kb on + strandat 2153.342 kb on + strandat 2153.342 kb on + strandat 2153.342 kb on + strandat 2153.342 kb on + strandat 2154.277 kb on + strandat 2154.277 kb on + strandat 2154.293 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Disodium Glutarate (C)
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2,153,342 + -0.3
2,153,342 + -0.4
2,153,342 + +0.0
2,153,342 + -0.1
2,153,342 + +0.3
2,154,277 + -0.6
2,154,277 + +0.5
2,154,293 + +0.2

Or see this region's nucleotide sequence