Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09240 and ABZR87_RS09245 are separated by 88 nucleotides ABZR87_RS09245 and ABZR87_RS09250 are separated by 16 nucleotides ABZR87_RS09250 and ABZR87_RS09255 are separated by 44 nucleotides ABZR87_RS09255 and ABZR87_RS09260 are separated by 62 nucleotides
ABZR87_RS09240: ABZR87_RS09240 - MAPEG family protein, at 1,955,417 to 1,955,800
_RS09240
ABZR87_RS09245: ABZR87_RS09245 - RNA-binding S4 domain-containing protein, at 1,955,889 to 1,956,110
_RS09245
ABZR87_RS09250: ABZR87_RS09250 - YceI family protein, at 1,956,127 to 1,956,690
_RS09250
ABZR87_RS09255: ABZR87_RS09255 - glutamine--tRNA ligase/YqeY domain fusion protein, at 1,956,735 to 1,958,486
_RS09255
ABZR87_RS09260: ABZR87_RS09260 - lipase secretion chaperone, at 1,958,549 to 1,959,568
_RS09260
Position (kb)
1956
1957
1958
1959 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1955.844 kb on + strand at 1956.128 kb on + strand at 1956.129 kb on - strand at 1956.599 kb on + strand, within ABZR87_RS09250 at 1956.673 kb on + strand at 1956.674 kb on - strand at 1956.674 kb on - strand at 1956.736 kb on + strand at 1956.736 kb on + strand at 1956.736 kb on + strand at 1956.737 kb on - strand at 1956.737 kb on - strand at 1956.737 kb on - strand at 1956.737 kb on - strand at 1956.737 kb on - strand at 1956.737 kb on - strand at 1956.737 kb on - strand at 1958.550 kb on + strand at 1958.551 kb on - strand at 1958.551 kb on - strand at 1958.551 kb on - strand at 1958.700 kb on + strand, within ABZR87_RS09260 at 1958.701 kb on - strand, within ABZR87_RS09260 at 1958.892 kb on - strand, within ABZR87_RS09260 at 1959.019 kb on - strand, within ABZR87_RS09260 at 1959.048 kb on + strand, within ABZR87_RS09260 at 1959.048 kb on + strand, within ABZR87_RS09260 at 1959.049 kb on - strand, within ABZR87_RS09260 at 1959.049 kb on - strand, within ABZR87_RS09260 at 1959.049 kb on - strand, within ABZR87_RS09260 at 1959.189 kb on + strand, within ABZR87_RS09260 at 1959.189 kb on + strand, within ABZR87_RS09260 at 1959.190 kb on - strand, within ABZR87_RS09260 at 1959.190 kb on - strand, within ABZR87_RS09260 at 1959.309 kb on + strand, within ABZR87_RS09260 at 1959.310 kb on - strand, within ABZR87_RS09260 at 1959.359 kb on - strand, within ABZR87_RS09260
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 1,955,844 + -0.6 1,956,128 + -0.5 1,956,129 - -0.8 1,956,599 + ABZR87_RS09250 0.84 +0.4 1,956,673 + +0.4 1,956,674 - +0.2 1,956,674 - -1.4 1,956,736 + +0.4 1,956,736 + +0.7 1,956,736 + +1.8 1,956,737 - -0.2 1,956,737 - +3.3 1,956,737 - -0.7 1,956,737 - +0.2 1,956,737 - +0.2 1,956,737 - -0.3 1,956,737 - +1.2 1,958,550 + +0.3 1,958,551 - +0.5 1,958,551 - +0.1 1,958,551 - +0.7 1,958,700 + ABZR87_RS09260 0.15 -0.3 1,958,701 - ABZR87_RS09260 0.15 +1.8 1,958,892 - ABZR87_RS09260 0.34 -0.9 1,959,019 - ABZR87_RS09260 0.46 -0.1 1,959,048 + ABZR87_RS09260 0.49 +0.5 1,959,048 + ABZR87_RS09260 0.49 +0.8 1,959,049 - ABZR87_RS09260 0.49 -0.0 1,959,049 - ABZR87_RS09260 0.49 +0.3 1,959,049 - ABZR87_RS09260 0.49 +0.3 1,959,189 + ABZR87_RS09260 0.63 -0.2 1,959,189 + ABZR87_RS09260 0.63 +0.1 1,959,190 - ABZR87_RS09260 0.63 -0.8 1,959,190 - ABZR87_RS09260 0.63 -1.5 1,959,309 + ABZR87_RS09260 0.75 +0.8 1,959,310 - ABZR87_RS09260 0.75 -0.4 1,959,359 - ABZR87_RS09260 0.79 -0.2
Or see this region's nucleotide sequence