Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS02075 and ABZR87_RS02080 are separated by 265 nucleotides ABZR87_RS02080 and ABZR87_RS02085 are separated by 36 nucleotides ABZR87_RS02085 and ABZR87_RS02090 are separated by 60 nucleotides ABZR87_RS02090 and ABZR87_RS02095 are separated by 613 nucleotides
ABZR87_RS02075: ABZR87_RS02075 - 23S ribosomal RNA, at 446,106 to 448,984
_RS02075
ABZR87_RS02080: ABZR87_RS02080 - tRNA-Ala, at 449,250 to 449,325
_RS02080
ABZR87_RS02085: ABZR87_RS02085 - tRNA-Ile, at 449,362 to 449,438
_RS02085
ABZR87_RS02090: ABZR87_RS02090 - 16S ribosomal RNA, at 449,499 to 451,038
_RS02090
ABZR87_RS02095: ABZR87_RS02095 - enoyl-CoA hydratase, at 451,652 to 452,428
_RS02095
Position (kb) 449
450
451
452 Strain fitness (log2 ratio) -2
-1
0
1
2 at 450.475 kb on - strand, within ABZR87_RS02090 at 451.365 kb on - strand at 451.365 kb on - strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.469 kb on + strand at 451.470 kb on - strand at 451.470 kb on - strand at 451.470 kb on - strand at 451.470 kb on - strand at 451.470 kb on - strand at 451.471 kb on + strand at 451.472 kb on - strand at 451.537 kb on - strand at 451.553 kb on + strand at 451.553 kb on + strand at 451.553 kb on + strand at 451.553 kb on + strand at 451.553 kb on + strand at 451.554 kb on - strand at 451.554 kb on - strand at 451.554 kb on - strand at 451.602 kb on - strand at 451.653 kb on + strand at 451.782 kb on + strand, within ABZR87_RS02095 at 451.782 kb on + strand, within ABZR87_RS02095 at 451.783 kb on - strand, within ABZR87_RS02095 at 451.783 kb on - strand, within ABZR87_RS02095
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 450,475 - ABZR87_RS02090 0.63 +0.6 451,365 - -0.5 451,365 - -0.3 451,469 + -0.3 451,469 + +0.5 451,469 + +0.6 451,469 + -2.2 451,469 + +1.2 451,469 + -0.3 451,469 + +0.1 451,469 + -1.4 451,470 - +0.7 451,470 - -1.0 451,470 - +0.4 451,470 - -1.0 451,470 - -1.8 451,471 + +0.6 451,472 - -0.3 451,537 - +1.8 451,553 + -1.0 451,553 + +0.7 451,553 + -1.4 451,553 + +0.3 451,553 + +0.3 451,554 - -0.6 451,554 - -0.0 451,554 - -0.4 451,602 - -0.9 451,653 + -0.0 451,782 + ABZR87_RS02095 0.17 +0.4 451,782 + ABZR87_RS02095 0.17 -0.2 451,783 - ABZR87_RS02095 0.17 -0.3 451,783 - ABZR87_RS02095 0.17 +1.3
Or see this region's nucleotide sequence