Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01785 and ABZR87_RS01790 are separated by 66 nucleotides ABZR87_RS01790 and ABZR87_RS01795 are separated by 22 nucleotides ABZR87_RS01795 and ABZR87_RS01800 are separated by 220 nucleotides ABZR87_RS01800 and ABZR87_RS01805 are separated by 5 nucleotides
ABZR87_RS01785: ABZR87_RS01785 - 2OG-Fe(II) oxygenase, at 379,840 to 380,706
_RS01785
ABZR87_RS01790: ABZR87_RS01790 - lytic transglycosylase domain-containing protein, at 380,773 to 381,534
_RS01790
ABZR87_RS01795: ABZR87_RS01795 - proline--tRNA ligase, at 381,557 to 383,281
_RS01795
ABZR87_RS01800: ABZR87_RS01800 - RNA pyrophosphohydrolase, at 383,502 to 384,209
_RS01800
ABZR87_RS01805: ABZR87_RS01805 - CNP1-like family protein, at 384,215 to 384,847
_RS01805
Position (kb) 381
382
383
384 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 380.589 kb on - strand, within ABZR87_RS01785 at 380.589 kb on - strand, within ABZR87_RS01785 at 380.742 kb on + strand at 380.742 kb on + strand at 380.742 kb on + strand at 380.743 kb on - strand at 380.743 kb on - strand at 380.743 kb on - strand at 380.743 kb on - strand at 380.747 kb on + strand at 380.748 kb on - strand at 380.748 kb on - strand at 380.748 kb on - strand at 380.802 kb on + strand at 380.802 kb on + strand at 380.802 kb on + strand at 380.803 kb on - strand at 380.803 kb on - strand at 380.803 kb on - strand at 380.803 kb on - strand at 380.921 kb on + strand, within ABZR87_RS01790 at 380.922 kb on - strand, within ABZR87_RS01790 at 380.987 kb on + strand, within ABZR87_RS01790 at 380.987 kb on + strand, within ABZR87_RS01790 at 380.987 kb on + strand, within ABZR87_RS01790 at 380.987 kb on + strand, within ABZR87_RS01790 at 380.987 kb on + strand, within ABZR87_RS01790 at 380.987 kb on + strand, within ABZR87_RS01790 at 380.988 kb on - strand, within ABZR87_RS01790 at 380.988 kb on - strand, within ABZR87_RS01790 at 380.988 kb on - strand, within ABZR87_RS01790 at 381.005 kb on + strand, within ABZR87_RS01790 at 381.005 kb on + strand, within ABZR87_RS01790 at 381.006 kb on - strand, within ABZR87_RS01790 at 381.032 kb on + strand, within ABZR87_RS01790 at 381.032 kb on + strand, within ABZR87_RS01790 at 381.033 kb on - strand, within ABZR87_RS01790 at 381.033 kb on - strand, within ABZR87_RS01790 at 381.033 kb on - strand, within ABZR87_RS01790 at 381.056 kb on + strand, within ABZR87_RS01790 at 381.057 kb on - strand, within ABZR87_RS01790 at 381.170 kb on + strand, within ABZR87_RS01790 at 381.170 kb on + strand, within ABZR87_RS01790 at 381.170 kb on + strand, within ABZR87_RS01790 at 381.170 kb on + strand, within ABZR87_RS01790 at 381.171 kb on - strand, within ABZR87_RS01790 at 381.171 kb on - strand, within ABZR87_RS01790 at 381.171 kb on - strand, within ABZR87_RS01790 at 381.245 kb on + strand, within ABZR87_RS01790 at 381.246 kb on - strand, within ABZR87_RS01790 at 381.246 kb on - strand, within ABZR87_RS01790 at 381.248 kb on + strand, within ABZR87_RS01790 at 381.248 kb on + strand, within ABZR87_RS01790 at 381.249 kb on - strand, within ABZR87_RS01790 at 381.249 kb on - strand, within ABZR87_RS01790 at 381.249 kb on - strand, within ABZR87_RS01790 at 381.275 kb on - strand, within ABZR87_RS01790 at 381.275 kb on - strand, within ABZR87_RS01790 at 381.335 kb on + strand, within ABZR87_RS01790 at 381.364 kb on + strand, within ABZR87_RS01790 at 381.364 kb on + strand, within ABZR87_RS01790 at 381.365 kb on - strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.431 kb on + strand, within ABZR87_RS01790 at 381.432 kb on - strand, within ABZR87_RS01790 at 381.432 kb on - strand, within ABZR87_RS01790 at 381.432 kb on - strand, within ABZR87_RS01790 at 381.432 kb on - strand, within ABZR87_RS01790 at 381.432 kb on - strand, within ABZR87_RS01790 at 381.558 kb on + strand at 383.294 kb on - strand at 383.294 kb on - strand at 383.294 kb on - strand at 383.294 kb on - strand at 383.465 kb on - strand at 383.465 kb on - strand at 383.467 kb on - strand at 383.467 kb on - strand at 383.467 kb on - strand at 383.467 kb on - strand at 383.476 kb on - strand at 383.481 kb on + strand at 383.481 kb on + strand at 383.481 kb on + strand at 383.482 kb on - strand at 383.482 kb on - strand at 383.626 kb on - strand, within ABZR87_RS01800 at 383.626 kb on - strand, within ABZR87_RS01800 at 383.764 kb on + strand, within ABZR87_RS01800 at 383.765 kb on - strand, within ABZR87_RS01800 at 383.886 kb on + strand, within ABZR87_RS01800 at 383.886 kb on + strand, within ABZR87_RS01800 at 383.887 kb on - strand, within ABZR87_RS01800 at 383.887 kb on - strand, within ABZR87_RS01800 at 383.894 kb on - strand, within ABZR87_RS01800 at 383.931 kb on + strand, within ABZR87_RS01800 at 383.931 kb on + strand, within ABZR87_RS01800 at 383.932 kb on - strand, within ABZR87_RS01800 at 383.932 kb on - strand, within ABZR87_RS01800 at 383.932 kb on - strand, within ABZR87_RS01800 at 383.998 kb on - strand, within ABZR87_RS01800 at 384.047 kb on + strand, within ABZR87_RS01800 at 384.087 kb on + strand, within ABZR87_RS01800 at 384.087 kb on + strand, within ABZR87_RS01800 at 384.087 kb on + strand, within ABZR87_RS01800 at 384.087 kb on + strand, within ABZR87_RS01800 at 384.088 kb on - strand, within ABZR87_RS01800 at 384.088 kb on - strand, within ABZR87_RS01800
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 380,589 - ABZR87_RS01785 0.86 -1.2 380,589 - ABZR87_RS01785 0.86 +0.2 380,742 + +1.3 380,742 + -0.7 380,742 + +1.4 380,743 - -0.2 380,743 - +1.1 380,743 - +0.3 380,743 - +0.0 380,747 + -0.4 380,748 - -1.2 380,748 - +0.3 380,748 - +0.7 380,802 + +0.9 380,802 + +0.1 380,802 + +0.5 380,803 - -0.4 380,803 - +0.7 380,803 - +0.9 380,803 - +0.6 380,921 + ABZR87_RS01790 0.19 +0.4 380,922 - ABZR87_RS01790 0.20 +0.2 380,987 + ABZR87_RS01790 0.28 +0.3 380,987 + ABZR87_RS01790 0.28 +0.1 380,987 + ABZR87_RS01790 0.28 -0.4 380,987 + ABZR87_RS01790 0.28 +0.5 380,987 + ABZR87_RS01790 0.28 -0.5 380,987 + ABZR87_RS01790 0.28 +0.2 380,988 - ABZR87_RS01790 0.28 -2.7 380,988 - ABZR87_RS01790 0.28 -0.1 380,988 - ABZR87_RS01790 0.28 +1.9 381,005 + ABZR87_RS01790 0.30 +0.9 381,005 + ABZR87_RS01790 0.30 +0.5 381,006 - ABZR87_RS01790 0.31 +1.3 381,032 + ABZR87_RS01790 0.34 +0.1 381,032 + ABZR87_RS01790 0.34 +0.0 381,033 - ABZR87_RS01790 0.34 -0.1 381,033 - ABZR87_RS01790 0.34 -0.0 381,033 - ABZR87_RS01790 0.34 -0.2 381,056 + ABZR87_RS01790 0.37 -0.2 381,057 - ABZR87_RS01790 0.37 -0.2 381,170 + ABZR87_RS01790 0.52 +1.5 381,170 + ABZR87_RS01790 0.52 +0.3 381,170 + ABZR87_RS01790 0.52 -1.1 381,170 + ABZR87_RS01790 0.52 +0.9 381,171 - ABZR87_RS01790 0.52 +1.0 381,171 - ABZR87_RS01790 0.52 -1.2 381,171 - ABZR87_RS01790 0.52 +0.9 381,245 + ABZR87_RS01790 0.62 -0.1 381,246 - ABZR87_RS01790 0.62 -0.3 381,246 - ABZR87_RS01790 0.62 +0.5 381,248 + ABZR87_RS01790 0.62 +0.9 381,248 + ABZR87_RS01790 0.62 -0.2 381,249 - ABZR87_RS01790 0.62 +1.2 381,249 - ABZR87_RS01790 0.62 +0.7 381,249 - ABZR87_RS01790 0.62 +0.8 381,275 - ABZR87_RS01790 0.66 -0.8 381,275 - ABZR87_RS01790 0.66 +0.7 381,335 + ABZR87_RS01790 0.74 -0.4 381,364 + ABZR87_RS01790 0.78 +0.4 381,364 + ABZR87_RS01790 0.78 +0.2 381,365 - ABZR87_RS01790 0.78 -0.1 381,431 + ABZR87_RS01790 0.86 +1.0 381,431 + ABZR87_RS01790 0.86 -0.8 381,431 + ABZR87_RS01790 0.86 -0.4 381,431 + ABZR87_RS01790 0.86 +1.0 381,431 + ABZR87_RS01790 0.86 +0.1 381,431 + ABZR87_RS01790 0.86 -1.3 381,431 + ABZR87_RS01790 0.86 +2.2 381,432 - ABZR87_RS01790 0.86 -0.0 381,432 - ABZR87_RS01790 0.86 +0.5 381,432 - ABZR87_RS01790 0.86 -0.4 381,432 - ABZR87_RS01790 0.86 +0.1 381,432 - ABZR87_RS01790 0.86 -0.4 381,558 + -0.5 383,294 - -0.7 383,294 - -0.2 383,294 - -0.4 383,294 - -0.7 383,465 - +0.6 383,465 - -1.7 383,467 - +1.1 383,467 - -1.0 383,467 - -1.3 383,467 - +0.9 383,476 - +3.1 383,481 + -0.4 383,481 + -0.2 383,481 + -1.8 383,482 - +0.9 383,482 - +0.1 383,626 - ABZR87_RS01800 0.18 +1.0 383,626 - ABZR87_RS01800 0.18 +1.5 383,764 + ABZR87_RS01800 0.37 -0.4 383,765 - ABZR87_RS01800 0.37 +1.1 383,886 + ABZR87_RS01800 0.54 +0.2 383,886 + ABZR87_RS01800 0.54 -0.5 383,887 - ABZR87_RS01800 0.54 +1.6 383,887 - ABZR87_RS01800 0.54 +0.5 383,894 - ABZR87_RS01800 0.55 -0.1 383,931 + ABZR87_RS01800 0.61 -1.4 383,931 + ABZR87_RS01800 0.61 +0.7 383,932 - ABZR87_RS01800 0.61 +0.8 383,932 - ABZR87_RS01800 0.61 +2.0 383,932 - ABZR87_RS01800 0.61 +0.2 383,998 - ABZR87_RS01800 0.70 -1.0 384,047 + ABZR87_RS01800 0.77 -0.7 384,087 + ABZR87_RS01800 0.83 +1.6 384,087 + ABZR87_RS01800 0.83 +0.1 384,087 + ABZR87_RS01800 0.83 -0.2 384,087 + ABZR87_RS01800 0.83 +0.0 384,088 - ABZR87_RS01800 0.83 -3.2 384,088 - ABZR87_RS01800 0.83 +1.0
Or see this region's nucleotide sequence