Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01545 and ABZR87_RS01550 are separated by 33 nucleotides ABZR87_RS01550 and ABZR87_RS01555 are separated by 101 nucleotides ABZR87_RS01555 and ABZR87_RS01560 overlap by 4 nucleotides
ABZR87_RS01545: ABZR87_RS01545 - L-arabinose ABC transporter ATP-binding protein AraG, at 325,086 to 326,615
_RS01545
ABZR87_RS01550: ABZR87_RS01550 - L-arabinose ABC transporter permease AraH, at 326,649 to 327,659
_RS01550
ABZR87_RS01555: ABZR87_RS01555 - barstar family protein, at 327,761 to 328,384
_RS01555
ABZR87_RS01560: ABZR87_RS01560 - ribonuclease domain-containing protein, at 328,381 to 328,812
_RS01560
Position (kb) 326
327
328 Strain fitness (log2 ratio) -2
-1
0
1
2 at 325.713 kb on + strand, within ABZR87_RS01545 at 325.713 kb on + strand, within ABZR87_RS01545 at 325.713 kb on + strand, within ABZR87_RS01545 at 325.713 kb on + strand, within ABZR87_RS01545 at 325.714 kb on - strand, within ABZR87_RS01545 at 325.714 kb on - strand, within ABZR87_RS01545 at 325.714 kb on - strand, within ABZR87_RS01545 at 325.740 kb on + strand, within ABZR87_RS01545 at 325.740 kb on + strand, within ABZR87_RS01545 at 325.741 kb on - strand, within ABZR87_RS01545 at 325.741 kb on - strand, within ABZR87_RS01545 at 325.866 kb on + strand, within ABZR87_RS01545 at 325.867 kb on - strand, within ABZR87_RS01545 at 325.867 kb on - strand, within ABZR87_RS01545 at 325.872 kb on + strand, within ABZR87_RS01545 at 325.872 kb on + strand, within ABZR87_RS01545 at 325.922 kb on - strand, within ABZR87_RS01545 at 326.029 kb on - strand, within ABZR87_RS01545 at 326.433 kb on + strand, within ABZR87_RS01545 at 326.433 kb on + strand, within ABZR87_RS01545 at 326.434 kb on - strand, within ABZR87_RS01545 at 326.434 kb on - strand, within ABZR87_RS01545 at 326.445 kb on + strand, within ABZR87_RS01545 at 326.445 kb on + strand, within ABZR87_RS01545 at 326.445 kb on + strand, within ABZR87_RS01545 at 326.446 kb on - strand, within ABZR87_RS01545 at 326.446 kb on - strand, within ABZR87_RS01545 at 326.446 kb on - strand, within ABZR87_RS01545 at 326.648 kb on + strand at 326.648 kb on + strand at 326.648 kb on + strand at 326.648 kb on + strand at 326.648 kb on + strand at 326.649 kb on - strand at 326.649 kb on - strand at 326.707 kb on + strand at 326.707 kb on + strand at 326.975 kb on + strand, within ABZR87_RS01550 at 326.975 kb on + strand, within ABZR87_RS01550 at 326.975 kb on + strand, within ABZR87_RS01550 at 326.976 kb on - strand, within ABZR87_RS01550 at 327.054 kb on + strand, within ABZR87_RS01550 at 327.055 kb on - strand, within ABZR87_RS01550 at 327.198 kb on + strand, within ABZR87_RS01550 at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.579 kb on + strand at 327.580 kb on - strand at 327.580 kb on - strand at 327.580 kb on - strand at 327.580 kb on - strand at 327.580 kb on - strand at 327.580 kb on - strand at 327.585 kb on + strand at 327.585 kb on + strand at 327.586 kb on - strand at 327.586 kb on - strand at 327.586 kb on - strand at 328.294 kb on - strand, within ABZR87_RS01555 at 328.294 kb on - strand, within ABZR87_RS01555 at 328.390 kb on + strand at 328.409 kb on + strand at 328.409 kb on + strand at 328.410 kb on - strand at 328.410 kb on - strand at 328.410 kb on - strand at 328.425 kb on - strand, within ABZR87_RS01560 at 328.425 kb on - strand, within ABZR87_RS01560 at 328.425 kb on - strand, within ABZR87_RS01560 at 328.425 kb on - strand, within ABZR87_RS01560 at 328.425 kb on - strand, within ABZR87_RS01560 at 328.427 kb on + strand, within ABZR87_RS01560 at 328.428 kb on - strand, within ABZR87_RS01560 at 328.428 kb on - strand, within ABZR87_RS01560 at 328.521 kb on - strand, within ABZR87_RS01560 at 328.521 kb on - strand, within ABZR87_RS01560 at 328.556 kb on + strand, within ABZR87_RS01560 at 328.557 kb on - strand, within ABZR87_RS01560 at 328.557 kb on - strand, within ABZR87_RS01560 at 328.557 kb on - strand, within ABZR87_RS01560 at 328.586 kb on + strand, within ABZR87_RS01560 at 328.587 kb on - strand, within ABZR87_RS01560
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 325,713 + ABZR87_RS01545 0.41 +0.6 325,713 + ABZR87_RS01545 0.41 -1.6 325,713 + ABZR87_RS01545 0.41 +0.0 325,713 + ABZR87_RS01545 0.41 -1.0 325,714 - ABZR87_RS01545 0.41 -1.3 325,714 - ABZR87_RS01545 0.41 +0.2 325,714 - ABZR87_RS01545 0.41 +0.3 325,740 + ABZR87_RS01545 0.43 +0.0 325,740 + ABZR87_RS01545 0.43 -0.3 325,741 - ABZR87_RS01545 0.43 +0.8 325,741 - ABZR87_RS01545 0.43 -0.1 325,866 + ABZR87_RS01545 0.51 +0.5 325,867 - ABZR87_RS01545 0.51 -0.2 325,867 - ABZR87_RS01545 0.51 +0.2 325,872 + ABZR87_RS01545 0.51 -0.8 325,872 + ABZR87_RS01545 0.51 -0.3 325,922 - ABZR87_RS01545 0.55 -0.1 326,029 - ABZR87_RS01545 0.62 +0.3 326,433 + ABZR87_RS01545 0.88 -0.0 326,433 + ABZR87_RS01545 0.88 +1.1 326,434 - ABZR87_RS01545 0.88 -1.3 326,434 - ABZR87_RS01545 0.88 -0.3 326,445 + ABZR87_RS01545 0.89 +0.8 326,445 + ABZR87_RS01545 0.89 -0.1 326,445 + ABZR87_RS01545 0.89 +0.1 326,446 - ABZR87_RS01545 0.89 -1.2 326,446 - ABZR87_RS01545 0.89 -0.9 326,446 - ABZR87_RS01545 0.89 -1.0 326,648 + +0.2 326,648 + +0.2 326,648 + +0.4 326,648 + -0.0 326,648 + -0.6 326,649 - -1.5 326,649 - +1.4 326,707 + -0.3 326,707 + +2.3 326,975 + ABZR87_RS01550 0.32 +0.2 326,975 + ABZR87_RS01550 0.32 +0.5 326,975 + ABZR87_RS01550 0.32 +0.3 326,976 - ABZR87_RS01550 0.32 -0.2 327,054 + ABZR87_RS01550 0.40 +0.3 327,055 - ABZR87_RS01550 0.40 +0.5 327,198 + ABZR87_RS01550 0.54 -1.1 327,579 + -1.6 327,579 + +0.7 327,579 + +0.3 327,579 + +0.3 327,579 + -2.0 327,579 + +2.5 327,579 + +0.8 327,579 + -0.7 327,579 + +0.0 327,579 + +0.3 327,579 + +0.1 327,579 + -0.3 327,580 - -0.2 327,580 - +0.7 327,580 - -0.7 327,580 - +0.5 327,580 - +0.6 327,580 - -0.8 327,585 + -1.0 327,585 + -0.9 327,586 - -0.1 327,586 - -2.6 327,586 - +0.3 328,294 - ABZR87_RS01555 0.85 -1.0 328,294 - ABZR87_RS01555 0.85 -1.5 328,390 + +0.1 328,409 + +0.7 328,409 + +2.1 328,410 - -0.1 328,410 - +0.0 328,410 - +0.6 328,425 - ABZR87_RS01560 0.10 -0.4 328,425 - ABZR87_RS01560 0.10 +0.0 328,425 - ABZR87_RS01560 0.10 +0.4 328,425 - ABZR87_RS01560 0.10 +0.5 328,425 - ABZR87_RS01560 0.10 +1.0 328,427 + ABZR87_RS01560 0.11 +0.1 328,428 - ABZR87_RS01560 0.11 -0.1 328,428 - ABZR87_RS01560 0.11 -1.2 328,521 - ABZR87_RS01560 0.32 -0.5 328,521 - ABZR87_RS01560 0.32 +1.2 328,556 + ABZR87_RS01560 0.41 +1.1 328,557 - ABZR87_RS01560 0.41 +0.7 328,557 - ABZR87_RS01560 0.41 -0.3 328,557 - ABZR87_RS01560 0.41 +0.6 328,586 + ABZR87_RS01560 0.47 +1.1 328,587 - ABZR87_RS01560 0.48 +0.5
Or see this region's nucleotide sequence