Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00715 and ABZR87_RS00720 are separated by 28 nucleotides ABZR87_RS00720 and ABZR87_RS00725 are separated by 27 nucleotides ABZR87_RS00725 and ABZR87_RS00730 are separated by 70 nucleotides ABZR87_RS00730 and ABZR87_RS00735 are separated by 16 nucleotides
ABZR87_RS00715: ABZR87_RS00715 - MotA/TolQ/ExbB proton channel family protein, at 145,974 to 146,594
_RS00715
ABZR87_RS00720: ABZR87_RS00720 - biopolymer transporter ExbD, at 146,623 to 147,051
_RS00720
ABZR87_RS00725: ABZR87_RS00725 - tetraacyldisaccharide 4'-kinase, at 147,079 to 148,128
_RS00725
ABZR87_RS00730: ABZR87_RS00730 - Trm112 family protein, at 148,199 to 148,387
_RS00730
ABZR87_RS00735: ABZR87_RS00735 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 148,404 to 149,210
_RS00735
Position (kb) 147
148
149 Strain fitness (log2 ratio) -1
0
1
2 at 146.103 kb on + strand, within ABZR87_RS00715 at 146.103 kb on + strand, within ABZR87_RS00715 at 146.432 kb on + strand, within ABZR87_RS00715 at 146.448 kb on + strand, within ABZR87_RS00715 at 146.448 kb on + strand, within ABZR87_RS00715 at 146.502 kb on + strand, within ABZR87_RS00715 at 146.502 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.526 kb on + strand, within ABZR87_RS00715 at 146.559 kb on + strand at 146.559 kb on + strand at 146.559 kb on + strand at 146.559 kb on + strand at 146.559 kb on + strand at 146.559 kb on + strand at 146.610 kb on - strand at 146.728 kb on + strand, within ABZR87_RS00720 at 146.728 kb on + strand, within ABZR87_RS00720 at 146.728 kb on + strand, within ABZR87_RS00720 at 146.728 kb on + strand, within ABZR87_RS00720 at 146.728 kb on + strand, within ABZR87_RS00720 at 146.728 kb on + strand, within ABZR87_RS00720 at 146.737 kb on + strand, within ABZR87_RS00720 at 146.737 kb on + strand, within ABZR87_RS00720 at 146.833 kb on + strand, within ABZR87_RS00720 at 146.833 kb on + strand, within ABZR87_RS00720 at 146.833 kb on + strand, within ABZR87_RS00720 at 146.833 kb on + strand, within ABZR87_RS00720 at 146.834 kb on - strand, within ABZR87_RS00720 at 146.834 kb on - strand, within ABZR87_RS00720 at 146.834 kb on - strand, within ABZR87_RS00720 at 147.049 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 146,103 + ABZR87_RS00715 0.21 +0.1 146,103 + ABZR87_RS00715 0.21 -0.3 146,432 + ABZR87_RS00715 0.74 -0.4 146,448 + ABZR87_RS00715 0.76 +0.8 146,448 + ABZR87_RS00715 0.76 +0.8 146,502 + ABZR87_RS00715 0.85 +1.1 146,502 + ABZR87_RS00715 0.85 +0.4 146,526 + ABZR87_RS00715 0.89 +0.1 146,526 + ABZR87_RS00715 0.89 -0.8 146,526 + ABZR87_RS00715 0.89 +0.0 146,526 + ABZR87_RS00715 0.89 +0.2 146,526 + ABZR87_RS00715 0.89 +0.3 146,526 + ABZR87_RS00715 0.89 -0.9 146,526 + ABZR87_RS00715 0.89 +0.7 146,526 + ABZR87_RS00715 0.89 +0.4 146,526 + ABZR87_RS00715 0.89 -0.6 146,559 + +0.5 146,559 + +1.3 146,559 + -0.4 146,559 + +0.4 146,559 + +1.9 146,559 + +0.0 146,610 - +0.1 146,728 + ABZR87_RS00720 0.24 -0.1 146,728 + ABZR87_RS00720 0.24 +0.2 146,728 + ABZR87_RS00720 0.24 -1.4 146,728 + ABZR87_RS00720 0.24 +0.6 146,728 + ABZR87_RS00720 0.24 +0.5 146,728 + ABZR87_RS00720 0.24 -0.5 146,737 + ABZR87_RS00720 0.27 -0.5 146,737 + ABZR87_RS00720 0.27 -0.6 146,833 + ABZR87_RS00720 0.49 -0.3 146,833 + ABZR87_RS00720 0.49 -1.0 146,833 + ABZR87_RS00720 0.49 -0.2 146,833 + ABZR87_RS00720 0.49 +1.0 146,834 - ABZR87_RS00720 0.49 +1.2 146,834 - ABZR87_RS00720 0.49 +0.7 146,834 - ABZR87_RS00720 0.49 -0.0 147,049 + -0.9
Or see this region's nucleotide sequence