Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00055 and ABZR87_RS00060 are separated by 10 nucleotides ABZR87_RS00060 and ABZR87_RS00065 are separated by 12 nucleotides ABZR87_RS00065 and ABZR87_RS00070 overlap by 16 nucleotides ABZR87_RS00070 and ABZR87_RS00075 overlap by 4 nucleotides
ABZR87_RS00055: ABZR87_RS00055 - threonine-phosphate decarboxylase CobD, at 13,001 to 14,008
_RS00055
ABZR87_RS00060: ABZR87_RS00060 - cobalamin-binding protein, at 14,019 to 14,975
_RS00060
ABZR87_RS00065: ABZR87_RS00065 - alpha-ribazole phosphatase, at 14,988 to 15,575
_RS00065
ABZR87_RS00070: ABZR87_RS00070 - adenosylcobinamide-GDP ribazoletransferase, at 15,560 to 16,330
_RS00070
ABZR87_RS00075: ABZR87_RS00075 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 16,327 to 17,391
_RS00075
Position (kb) 14
15
16 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 14.055 kb on + strand at 14.055 kb on + strand at 14.055 kb on + strand at 14.055 kb on + strand at 14.055 kb on + strand at 14.055 kb on + strand at 14.055 kb on + strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.056 kb on - strand at 14.251 kb on - strand, within ABZR87_RS00060 at 14.444 kb on + strand, within ABZR87_RS00060 at 14.444 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.580 kb on + strand, within ABZR87_RS00060 at 14.581 kb on - strand, within ABZR87_RS00060 at 14.581 kb on - strand, within ABZR87_RS00060 at 14.581 kb on - strand, within ABZR87_RS00060 at 15.831 kb on + strand, within ABZR87_RS00070 at 15.831 kb on + strand, within ABZR87_RS00070 at 15.831 kb on + strand, within ABZR87_RS00070 at 15.831 kb on + strand, within ABZR87_RS00070 at 15.832 kb on - strand, within ABZR87_RS00070 at 15.832 kb on - strand, within ABZR87_RS00070 at 15.832 kb on - strand, within ABZR87_RS00070 at 15.832 kb on - strand, within ABZR87_RS00070 at 15.832 kb on - strand, within ABZR87_RS00070 at 16.164 kb on + strand, within ABZR87_RS00070 at 16.165 kb on - strand, within ABZR87_RS00070 at 16.282 kb on - strand at 16.282 kb on - strand at 16.282 kb on - strand at 16.516 kb on + strand, within ABZR87_RS00075 at 16.516 kb on + strand, within ABZR87_RS00075 at 16.516 kb on + strand, within ABZR87_RS00075 at 16.516 kb on + strand, within ABZR87_RS00075 at 16.517 kb on - strand, within ABZR87_RS00075 at 16.517 kb on - strand, within ABZR87_RS00075 at 16.517 kb on - strand, within ABZR87_RS00075 at 16.535 kb on + strand, within ABZR87_RS00075
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 14,055 + -1.0 14,055 + -0.1 14,055 + -0.6 14,055 + -1.2 14,055 + -0.0 14,055 + -1.2 14,055 + +0.4 14,056 - -0.3 14,056 - +0.2 14,056 - -0.8 14,056 - +2.9 14,056 - +2.7 14,056 - +0.1 14,056 - +0.3 14,056 - -0.4 14,056 - -0.3 14,056 - -0.0 14,251 - ABZR87_RS00060 0.24 +1.5 14,444 + ABZR87_RS00060 0.44 +0.3 14,444 + ABZR87_RS00060 0.44 +0.7 14,580 + ABZR87_RS00060 0.59 +0.5 14,580 + ABZR87_RS00060 0.59 +0.4 14,580 + ABZR87_RS00060 0.59 +0.3 14,580 + ABZR87_RS00060 0.59 +0.3 14,580 + ABZR87_RS00060 0.59 +0.2 14,580 + ABZR87_RS00060 0.59 +1.1 14,580 + ABZR87_RS00060 0.59 +0.2 14,581 - ABZR87_RS00060 0.59 +0.4 14,581 - ABZR87_RS00060 0.59 +1.0 14,581 - ABZR87_RS00060 0.59 +0.0 15,831 + ABZR87_RS00070 0.35 -0.5 15,831 + ABZR87_RS00070 0.35 +0.3 15,831 + ABZR87_RS00070 0.35 +0.8 15,831 + ABZR87_RS00070 0.35 +0.5 15,832 - ABZR87_RS00070 0.35 -0.1 15,832 - ABZR87_RS00070 0.35 +1.0 15,832 - ABZR87_RS00070 0.35 +0.5 15,832 - ABZR87_RS00070 0.35 -0.6 15,832 - ABZR87_RS00070 0.35 +1.5 16,164 + ABZR87_RS00070 0.78 +0.1 16,165 - ABZR87_RS00070 0.78 -1.8 16,282 - +1.0 16,282 - +1.5 16,282 - +0.3 16,516 + ABZR87_RS00075 0.18 -0.7 16,516 + ABZR87_RS00075 0.18 -0.4 16,516 + ABZR87_RS00075 0.18 -2.1 16,516 + ABZR87_RS00075 0.18 -0.5 16,517 - ABZR87_RS00075 0.18 +0.2 16,517 - ABZR87_RS00075 0.18 +0.3 16,517 - ABZR87_RS00075 0.18 +1.2 16,535 + ABZR87_RS00075 0.20 -1.4
Or see this region's nucleotide sequence