Experiment: Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0767 and BT0768 overlap by 17 nucleotides BT0768 and BT0769 are separated by 280 nucleotides BT0769 and BT0770 are separated by 39 nucleotides BT0770 and BT0771 are separated by 18 nucleotides
BT0767: BT0767 - putative para-aminobenzoate synthase component I (NCBI ptt file), at 957,437 to 958,429
BT0767
BT0768: BT0768 - putative para-aminobenzoate synthase component I (NCBI ptt file), at 958,413 to 959,009
BT0768
BT0769: BT0769 - conserved hypothetical protein (NCBI ptt file), at 959,290 to 959,961
BT0769
BT0770: BT0770 - conserved hypothetical protein (NCBI ptt file), at 960,001 to 960,447
BT0770
BT0771: BT0771 - 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file), at 960,466 to 962,478
BT0771
Position (kb) 959
960 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 958.291 kb on + strand, within BT0767 at 958.306 kb on - strand, within BT0767 at 958.544 kb on + strand, within BT0768 at 958.545 kb on - strand, within BT0768 at 958.546 kb on + strand, within BT0768 at 958.547 kb on - strand, within BT0768 at 958.591 kb on - strand, within BT0768 at 958.674 kb on - strand, within BT0768 at 958.680 kb on + strand, within BT0768 at 958.694 kb on + strand, within BT0768 at 958.806 kb on + strand, within BT0768 at 958.817 kb on + strand, within BT0768 at 958.817 kb on + strand, within BT0768 at 958.818 kb on - strand, within BT0768 at 958.888 kb on + strand, within BT0768 at 958.957 kb on + strand at 959.091 kb on + strand at 959.137 kb on + strand at 959.381 kb on - strand, within BT0769 at 959.387 kb on + strand, within BT0769 at 959.530 kb on + strand, within BT0769 at 959.532 kb on + strand, within BT0769 at 959.593 kb on + strand, within BT0769 at 959.593 kb on + strand, within BT0769 at 959.701 kb on + strand, within BT0769 at 959.703 kb on + strand, within BT0769 at 959.977 kb on + strand at 960.291 kb on + strand, within BT0770 at 960.445 kb on + strand at 960.678 kb on + strand, within BT0771 at 960.691 kb on - strand, within BT0771 at 960.951 kb on + strand, within BT0771 at 960.951 kb on + strand, within BT0771 at 960.952 kb on - strand, within BT0771 at 960.952 kb on - strand, within BT0771
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM remove 958,291 + BT0767 0.86 +0.4 958,306 - BT0767 0.88 -0.2 958,544 + BT0768 0.22 -2.2 958,545 - BT0768 0.22 -0.2 958,546 + BT0768 0.22 -1.8 958,547 - BT0768 0.22 -1.8 958,591 - BT0768 0.30 -1.9 958,674 - BT0768 0.44 -2.2 958,680 + BT0768 0.45 +0.8 958,694 + BT0768 0.47 +0.4 958,806 + BT0768 0.66 -0.3 958,817 + BT0768 0.68 -2.8 958,817 + BT0768 0.68 -3.4 958,818 - BT0768 0.68 -0.7 958,888 + BT0768 0.80 +1.0 958,957 + +0.8 959,091 + -0.2 959,137 + +0.6 959,381 - BT0769 0.14 -3.4 959,387 + BT0769 0.14 -1.6 959,530 + BT0769 0.36 -0.2 959,532 + BT0769 0.36 +1.1 959,593 + BT0769 0.45 -1.2 959,593 + BT0769 0.45 -3.7 959,701 + BT0769 0.61 -3.2 959,703 + BT0769 0.61 +1.4 959,977 + -1.8 960,291 + BT0770 0.65 -2.1 960,445 + -1.0 960,678 + BT0771 0.11 -1.2 960,691 - BT0771 0.11 -0.2 960,951 + BT0771 0.24 -0.2 960,951 + BT0771 0.24 -3.3 960,952 - BT0771 0.24 -1.8 960,952 - BT0771 0.24 -1.8
Or see this region's nucleotide sequence