Experiment: Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0492 and BT0493 are separated by 33 nucleotides BT0493 and BT0494 are separated by 51 nucleotides BT0494 and BT0495 are separated by 31 nucleotides
BT0492: BT0492 - integral membrane protein (NCBI ptt file), at 607,405 to 608,022
BT0492
BT0493: BT0493 - hypothetical protein (NCBI ptt file), at 608,056 to 608,757
BT0493
BT0494: BT0494 - protoporphyrin IX magnesium chelatase (NCBI ptt file), at 608,809 to 611,373
BT0494
BT0495: BT0495 - cobalamin biosynthesis protein (NCBI ptt file), at 611,405 to 613,201
BT0495
Position (kb) 608
609
610
611
612 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 607.910 kb on + strand, within BT0492 at 607.958 kb on - strand, within BT0492 at 608.005 kb on - strand at 608.005 kb on - strand at 608.013 kb on + strand at 608.014 kb on - strand at 608.027 kb on - strand at 608.140 kb on + strand, within BT0493 at 608.288 kb on + strand, within BT0493 at 608.296 kb on + strand, within BT0493 at 608.391 kb on - strand, within BT0493 at 608.462 kb on - strand, within BT0493 at 608.564 kb on - strand, within BT0493 at 608.625 kb on - strand, within BT0493 at 608.724 kb on + strand at 608.734 kb on - strand at 608.737 kb on + strand at 608.737 kb on + strand at 608.761 kb on - strand at 608.810 kb on + strand at 608.863 kb on - strand at 608.904 kb on + strand at 608.905 kb on - strand at 608.994 kb on + strand at 609.277 kb on + strand, within BT0494 at 609.278 kb on - strand, within BT0494 at 609.278 kb on - strand, within BT0494 at 609.283 kb on - strand, within BT0494 at 609.286 kb on + strand, within BT0494 at 609.345 kb on + strand, within BT0494 at 609.346 kb on - strand, within BT0494 at 609.619 kb on + strand, within BT0494 at 609.620 kb on - strand, within BT0494 at 609.699 kb on - strand, within BT0494 at 609.719 kb on + strand, within BT0494 at 609.796 kb on - strand, within BT0494 at 610.112 kb on + strand, within BT0494 at 610.165 kb on + strand, within BT0494 at 610.170 kb on + strand, within BT0494 at 610.172 kb on + strand, within BT0494 at 610.214 kb on + strand, within BT0494 at 610.219 kb on - strand, within BT0494 at 610.245 kb on + strand, within BT0494 at 610.300 kb on - strand, within BT0494 at 610.549 kb on - strand, within BT0494 at 610.608 kb on + strand, within BT0494 at 610.609 kb on - strand, within BT0494 at 610.708 kb on - strand, within BT0494 at 611.257 kb on - strand at 611.374 kb on + strand at 611.445 kb on + strand at 611.446 kb on - strand at 611.494 kb on - strand at 611.499 kb on + strand at 611.796 kb on + strand, within BT0495 at 611.796 kb on + strand, within BT0495 at 611.796 kb on + strand, within BT0495 at 612.020 kb on - strand, within BT0495 at 612.021 kb on + strand, within BT0495 at 612.022 kb on - strand, within BT0495 at 612.066 kb on - strand, within BT0495 at 612.120 kb on + strand, within BT0495 at 612.121 kb on - strand, within BT0495 at 612.129 kb on - strand, within BT0495 at 612.181 kb on + strand, within BT0495 at 612.181 kb on + strand, within BT0495 at 612.238 kb on + strand, within BT0495 at 612.239 kb on - strand, within BT0495 at 612.247 kb on - strand, within BT0495 at 612.314 kb on - strand, within BT0495
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM remove 607,910 + BT0492 0.82 -2.5 607,958 - BT0492 0.89 +0.8 608,005 - +3.2 608,005 - -0.2 608,013 + -1.2 608,014 - +0.8 608,027 - +1.6 608,140 + BT0493 0.12 -3.3 608,288 + BT0493 0.33 +1.4 608,296 + BT0493 0.34 -2.0 608,391 - BT0493 0.48 -1.2 608,462 - BT0493 0.58 -0.2 608,564 - BT0493 0.72 +2.4 608,625 - BT0493 0.81 -0.2 608,724 + -1.7 608,734 - -1.7 608,737 + -0.2 608,737 + +1.6 608,761 - -0.2 608,810 + -0.2 608,863 - -1.7 608,904 + +2.0 608,905 - +0.7 608,994 + +2.6 609,277 + BT0494 0.18 -0.2 609,278 - BT0494 0.18 -0.2 609,278 - BT0494 0.18 +1.8 609,283 - BT0494 0.18 -0.2 609,286 + BT0494 0.19 -3.3 609,345 + BT0494 0.21 -0.2 609,346 - BT0494 0.21 -0.5 609,619 + BT0494 0.32 -2.7 609,620 - BT0494 0.32 -0.5 609,699 - BT0494 0.35 -1.2 609,719 + BT0494 0.35 -2.7 609,796 - BT0494 0.38 -0.2 610,112 + BT0494 0.51 -1.2 610,165 + BT0494 0.53 +1.4 610,170 + BT0494 0.53 +3.4 610,172 + BT0494 0.53 +2.2 610,214 + BT0494 0.55 -1.5 610,219 - BT0494 0.55 -0.2 610,245 + BT0494 0.56 -0.2 610,300 - BT0494 0.58 +0.3 610,549 - BT0494 0.68 -1.2 610,608 + BT0494 0.70 -0.2 610,609 - BT0494 0.70 +1.8 610,708 - BT0494 0.74 -0.2 611,257 - -0.7 611,374 + +0.8 611,445 + -1.2 611,446 - -1.6 611,494 - +1.5 611,499 + -0.2 611,796 + BT0495 0.22 -2.7 611,796 + BT0495 0.22 -1.2 611,796 + BT0495 0.22 -1.7 612,020 - BT0495 0.34 -1.2 612,021 + BT0495 0.34 -0.4 612,022 - BT0495 0.34 +0.2 612,066 - BT0495 0.37 +1.4 612,120 + BT0495 0.40 -1.2 612,121 - BT0495 0.40 -0.2 612,129 - BT0495 0.40 -3.1 612,181 + BT0495 0.43 +0.4 612,181 + BT0495 0.43 -3.2 612,238 + BT0495 0.46 +0.8 612,239 - BT0495 0.46 -2.5 612,247 - BT0495 0.47 -1.7 612,314 - BT0495 0.51 -1.5
Or see this region's nucleotide sequence