Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4955

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
5,493,951	+				-0.8
5,493,952	-				+1.4
5,493,954	+				-1.1
5,494,329	+				+0.0
5,494,329	+				-0.2
5,494,331	+				-0.3
5,494,428	+				-0.3
5,494,428	+				+0.8
5,494,473	+				-2.3
5,494,522	-				-0.2
5,494,551	+				+0.0
5,494,554	+				-0.3
5,494,604	+				+0.8
5,494,640	+				-1.8
5,494,645	-				-1.3
5,494,750	-				-1.0
5,494,753	+				-1.5
5,494,754	-				+0.4
5,494,819	+				-0.6
5,494,828	-				-1.4
5,495,021	+		Pf1N1B4_4955	0.17	-0.6
5,495,021	+		Pf1N1B4_4955	0.17	+0.7
5,495,021	+		Pf1N1B4_4955	0.17	-0.4
5,495,022	-		Pf1N1B4_4955	0.17	+0.4
5,495,022	-		Pf1N1B4_4955	0.17	-0.8
5,495,022	-		Pf1N1B4_4955	0.17	-2.2
5,495,022	-		Pf1N1B4_4955	0.17	+0.1
5,495,022	-		Pf1N1B4_4955	0.17	-1.1
5,495,022	-		Pf1N1B4_4955	0.17	+1.6
5,495,159	+		Pf1N1B4_4955	0.33	-0.5
5,495,160	-		Pf1N1B4_4955	0.33	+0.3
5,495,397	+		Pf1N1B4_4955	0.60	+3.9
5,495,397	+		Pf1N1B4_4955	0.60	-0.2
5,495,397	+		Pf1N1B4_4955	0.60	+2.2
5,495,398	-		Pf1N1B4_4955	0.60	+0.4
5,495,456	+		Pf1N1B4_4955	0.67	+0.8
5,495,456	+		Pf1N1B4_4955	0.67	-1.5
5,495,508	+		Pf1N1B4_4955	0.73	-0.8
5,495,508	+		Pf1N1B4_4955	0.73	+0.7
5,495,509	-		Pf1N1B4_4955	0.73	-1.3
5,495,523	+		Pf1N1B4_4955	0.75	-0.9
5,495,771	+				+1.5
5,495,772	-				-2.3
5,495,772	-				-1.3
5,495,776	-				-0.2
5,495,776	-				-1.9
5,495,776	-				-0.5
5,495,776	-				-0.7
5,495,776	-				-1.1
5,495,779	+				-1.3
5,495,790	+				-1.2
5,495,791	-				+0.6
5,495,791	-				-1.8
5,495,849	+				-0.2
5,495,849	+				+0.3
5,496,007	+		Pf1N1B4_4956	0.12	+1.3
5,496,008	-		Pf1N1B4_4956	0.12	+0.8
5,496,325	-		Pf1N1B4_4956	0.47	+0.2
5,496,325	-		Pf1N1B4_4956	0.47	+1.5
5,496,334	+				-0.5
5,496,334	+		Pf1N1B4_4956	0.48	-0.2
5,496,334	+		Pf1N1B4_4956	0.48	+3.6
5,496,334	+		Pf1N1B4_4956	0.48	-0.2
5,496,334	+		Pf1N1B4_4956	0.48	-1.0
5,496,334	+		Pf1N1B4_4956	0.48	+0.3
5,496,334	+		Pf1N1B4_4956	0.48	+1.3
5,496,334	+				-0.5
5,496,335	-		Pf1N1B4_4956	0.48	-0.1
5,496,557	+		Pf1N1B4_4956	0.73	-0.6
5,496,558	-		Pf1N1B4_4956	0.73	-1.0
5,496,558	-		Pf1N1B4_4956	0.73	+0.5
5,496,591	-		Pf1N1B4_4956	0.77	+0.5
5,496,661	-		Pf1N1B4_4956	0.85	+1.6