Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4931

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
5,464,327	-		Pf1N1B4_4930	0.46	-1.9
5,464,831	+				-0.9
5,464,831	+		Pf1N1B4_4930	0.90	+0.8
5,464,831	+		Pf1N1B4_4930	0.90	+0.2
5,464,832	-		Pf1N1B4_4930	0.90	-0.8
5,465,170	-				+1.8
5,465,250	+				+0.0
5,465,251	-				-0.8
5,465,251	-				+2.3
5,465,251	-				-0.9
5,466,114	+		Pf1N1B4_4931	0.63	-0.7
5,466,115	-		Pf1N1B4_4931	0.63	-0.3
5,466,457	-				-1.9
5,466,460	-		Pf1N1B4_4931	0.86	-2.1
5,466,460	-		Pf1N1B4_4931	0.86	-0.8
5,466,606	+				-0.5
5,466,622	-				-0.3
5,466,646	+				+0.5
5,466,647	-				-1.8
5,466,647	-				-1.5
5,466,824	+		Pf1N1B4_4932	0.11	-3.1
5,466,847	+				-1.2
5,467,006	+		Pf1N1B4_4932	0.28	-0.2
5,467,117	+		Pf1N1B4_4932	0.39	+1.1
5,467,567	+		Pf1N1B4_4932	0.80	-0.5
5,467,567	+		Pf1N1B4_4932	0.80	-0.5
5,467,568	-		Pf1N1B4_4932	0.80	-1.2