Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4848

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
5,356,404	+		Pf1N1B4_4847	0.49	+2.8
5,356,404	+		Pf1N1B4_4847	0.49	+0.8
5,356,404	+		Pf1N1B4_4847	0.49	-1.2
5,356,404	+		Pf1N1B4_4847	0.49	-1.1
5,356,405	-		Pf1N1B4_4847	0.49	-0.5
5,356,720	-		Pf1N1B4_4847	0.77	-2.7
5,356,720	-		Pf1N1B4_4847	0.77	+1.6
5,356,994	-				+0.0
5,357,342	+		Pf1N1B4_4848	0.42	-1.8
5,357,343	-		Pf1N1B4_4848	0.42	+0.6
5,357,343	-				-0.5
5,357,348	+		Pf1N1B4_4848	0.42	+0.3
5,357,349	-		Pf1N1B4_4848	0.42	-1.0
5,357,387	+		Pf1N1B4_4848	0.47	-1.2
5,357,445	-		Pf1N1B4_4848	0.54	+0.4
5,357,528	+		Pf1N1B4_4848	0.64	+3.7
5,357,529	-		Pf1N1B4_4848	0.64	-1.4
5,357,625	-				+2.2
5,357,651	+		Pf1N1B4_4848	0.79	-0.1
5,357,651	+		Pf1N1B4_4848	0.79	-1.9
5,357,651	+				-1.4
5,357,652	-		Pf1N1B4_4848	0.79	+2.1
5,357,976	+		Pf1N1B4_4849	0.15	+1.3
5,358,306	+		Pf1N1B4_4849	0.52	+0.1
5,358,307	-		Pf1N1B4_4849	0.52	+0.7
5,358,712	+				-0.0
5,358,757	+				+0.7
5,358,780	-				-0.1