Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4713

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
5,209,186	-				-1.6
5,209,281	+		Pf1N1B4_4711	0.88	+0.5
5,209,411	+				+0.2
5,209,412	-				-1.1
5,209,412	-				-0.6
5,209,412	-				-0.9
5,209,412	-				-0.3
5,209,412	-				+1.7
5,209,412	-				+0.4
5,209,412	-				-1.5
5,209,579	+		Pf1N1B4_4712	0.21	+1.1
5,209,579	+		Pf1N1B4_4712	0.21	-0.1
5,209,579	+		Pf1N1B4_4712	0.21	-1.7
5,209,580	-		Pf1N1B4_4712	0.21	-0.1
5,209,765	+				+0.7
5,210,021	-				+0.1
5,210,154	+				-1.9
5,210,155	-				-0.3
5,210,155	-				+0.2
5,210,236	+		Pf1N1B4_4713	0.15	-2.7
5,210,606	+		Pf1N1B4_4713	0.41	-0.4
5,210,606	+		Pf1N1B4_4713	0.41	+1.1
5,210,606	+		Pf1N1B4_4713	0.41	-0.6
5,210,606	+		Pf1N1B4_4713	0.41	+0.1
5,210,606	+		Pf1N1B4_4713	0.41	-2.8
5,210,607	-		Pf1N1B4_4713	0.41	-1.5
5,210,607	-		Pf1N1B4_4713	0.41	-1.0
5,210,607	-				-0.9
5,210,607	-		Pf1N1B4_4713	0.41	-2.5
5,210,607	-		Pf1N1B4_4713	0.41	-0.9
5,210,607	-		Pf1N1B4_4713	0.41	+0.6
5,211,299	+		Pf1N1B4_4713	0.87	-2.0
5,211,376	+				+1.6
5,211,376	+				-1.5
5,211,377	-				-0.6
5,211,377	-				-0.5
5,211,562	+				-1.0
5,211,563	-				+0.7
5,211,563	-				-0.8
5,211,563	-				-0.2
5,211,727	-				-1.8
5,211,727	-				+0.0
5,211,727	-				-0.3
5,212,091	-		Pf1N1B4_4715	0.40	-0.7
5,212,154	-		Pf1N1B4_4715	0.48	+1.4
5,212,154	-		Pf1N1B4_4715	0.48	+0.1