Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4453

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
4,912,966	+				-0.6
4,913,123	-				-1.7
4,913,162	+				+0.0
4,913,162	+				-0.8
4,913,258	+				-0.2
4,913,284	-				+2.8
4,913,439	+				-1.6
4,913,440	-				-1.0
4,913,440	-				+2.5
4,913,500	+				-1.0
4,913,531	+				-0.8
4,913,531	+				-1.6
4,913,531	+				+1.7
4,913,559	+				-0.1
4,913,559	+				-0.2
4,913,560	-				-0.8
4,913,601	+				+2.3
4,913,691	-				+1.8
4,914,114	+		Pf1N1B4_4453	0.18	-1.7
4,914,566	+		Pf1N1B4_4453	0.50	-1.6
4,914,567	-		Pf1N1B4_4453	0.50	-0.8
4,914,778	+		Pf1N1B4_4453	0.65	+1.0
4,914,786	-		Pf1N1B4_4453	0.65	+1.8
4,914,786	-		Pf1N1B4_4453	0.65	-2.4
4,914,786	-		Pf1N1B4_4453	0.65	+1.2
4,914,786	-		Pf1N1B4_4453	0.65	-0.9
4,914,968	+		Pf1N1B4_4453	0.78	-2.0
4,914,969	-		Pf1N1B4_4453	0.78	-1.0
4,914,969	-		Pf1N1B4_4453	0.78	-2.2
4,915,014	+		Pf1N1B4_4453	0.82	-0.0
4,915,015	-		Pf1N1B4_4453	0.82	-1.6
4,915,015	-		Pf1N1B4_4453	0.82	+0.6
4,915,071	+		Pf1N1B4_4453	0.86	+0.2
4,915,155	+				+0.2
4,915,156	-				+0.4
4,915,305	+				+1.8
4,915,351	-		Pf1N1B4_4454	0.13	-0.6
4,915,502	+		Pf1N1B4_4454	0.35	+0.5
4,915,502	+		Pf1N1B4_4454	0.35	-2.0
4,915,919	-				+0.1
4,915,922	-				-1.4
4,916,107	+		Pf1N1B4_4455	0.26	-0.4
4,916,108	-		Pf1N1B4_4455	0.26	+0.6
4,916,212	+		Pf1N1B4_4455	0.42	-1.6
4,916,212	+		Pf1N1B4_4455	0.42	-0.7
4,916,231	+		Pf1N1B4_4455	0.45	-0.7