Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4452

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
4,912,326	+		Pf1N1B4_4451	0.81	+0.6
4,912,326	+		Pf1N1B4_4451	0.81	+1.4
4,912,326	+		Pf1N1B4_4451	0.81	+1.0
4,912,327	-		Pf1N1B4_4451	0.81	+2.2
4,912,327	-		Pf1N1B4_4451	0.81	+1.3
4,912,400	+		Pf1N1B4_4451	0.89	+0.2
4,912,497	+				+1.8
4,912,497	+				-1.4
4,912,497	+				-0.1
4,912,497	+				-1.9
4,912,497	+				+1.6
4,912,498	-				-0.4
4,912,664	-				-0.3
4,912,664	-				-0.4
4,912,725	+				+0.4
4,912,726	-				-0.6
4,912,789	-				-0.7
4,912,789	-				+0.3
4,912,789	-				+1.7
4,912,789	-				-0.9
4,912,800	+				-1.2
4,912,814	-				+0.2
4,912,865	+				-0.5
4,912,866	-				+0.2
4,912,866	-				-0.1
4,912,866	-				+0.8
4,912,866	-				+0.5
4,912,866	-				+3.1
4,912,966	+				-0.6
4,913,123	-				-1.7
4,913,162	+				+0.0
4,913,162	+				-0.8
4,913,258	+				-0.2
4,913,284	-				+2.8
4,913,439	+				-1.6
4,913,440	-				-1.0
4,913,440	-				+2.5
4,913,500	+				-1.0
4,913,531	+				-0.8
4,913,531	+				-1.6
4,913,531	+				+1.7
4,913,559	+				-0.1
4,913,559	+				-0.2
4,913,560	-				-0.8
4,913,601	+				+2.3
4,913,691	-				+1.8
4,914,114	+		Pf1N1B4_4453	0.18	-1.7