Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3437

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
3,828,357	+		Pf1N1B4_3435	0.17	+0.8
3,828,357	+		Pf1N1B4_3435	0.17	-2.0
3,828,358	-		Pf1N1B4_3435	0.17	+0.8
3,828,415	-		Pf1N1B4_3435	0.24	-0.5
3,828,625	+		Pf1N1B4_3435	0.52	+2.4
3,828,625	+		Pf1N1B4_3435	0.52	-1.4
3,828,991	+				+0.8
3,828,991	+				-1.1
3,828,992	-				-1.0
3,828,992	-				+0.2
3,829,280	+		Pf1N1B4_3436	0.63	+0.2
3,829,281	-		Pf1N1B4_3436	0.63	+0.2
3,829,281	-		Pf1N1B4_3436	0.63	+1.5
3,829,350	+				-0.5
3,829,351	-				-1.0
3,829,532	-		Pf1N1B4_3437	0.24	+1.8
3,829,558	-		Pf1N1B4_3437	0.27	+0.2
3,829,945	+		Pf1N1B4_3437	0.70	+1.4
3,829,980	+		Pf1N1B4_3437	0.74	-1.2
3,829,980	+		Pf1N1B4_3437	0.74	+0.8
3,829,981	-		Pf1N1B4_3437	0.74	+1.6
3,829,981	-		Pf1N1B4_3437	0.74	+0.1
3,829,981	-		Pf1N1B4_3437	0.74	+3.8
3,829,981	-		Pf1N1B4_3437	0.74	-0.1
3,829,981	-		Pf1N1B4_3437	0.74	-2.5
3,830,005	-		Pf1N1B4_3437	0.76	+0.7
3,830,007	+		Pf1N1B4_3437	0.76	+0.8
3,830,007	+		Pf1N1B4_3437	0.76	-0.5
3,830,007	+		Pf1N1B4_3437	0.76	-0.1
3,830,008	-		Pf1N1B4_3437	0.77	+0.8
3,830,008	-		Pf1N1B4_3437	0.77	+1.0
3,830,008	-		Pf1N1B4_3437	0.77	+0.8
3,830,008	-		Pf1N1B4_3437	0.77	-1.1
3,830,008	-		Pf1N1B4_3437	0.77	+1.2
3,830,008	-		Pf1N1B4_3437	0.77	+2.2
3,830,008	-		Pf1N1B4_3437	0.77	+0.1
3,830,008	-		Pf1N1B4_3437	0.77	+1.2
3,830,008	-		Pf1N1B4_3437	0.77	+0.5
3,830,351	+				+1.5
3,830,543	-				+0.0
3,830,552	-				-0.7
3,830,619	-				-2.2
3,830,834	+		Pf1N1B4_3438	0.12	+0.5
3,830,834	+		Pf1N1B4_3438	0.12	-1.6
3,830,834	+		Pf1N1B4_3438	0.12	+0.2
3,830,834	+		Pf1N1B4_3438	0.12	+0.3
3,830,835	-				+0.0
3,830,835	-		Pf1N1B4_3438	0.12	-0.8
3,830,912	+		Pf1N1B4_3438	0.13	+1.2
3,830,912	+		Pf1N1B4_3438	0.13	-0.8
3,830,912	+		Pf1N1B4_3438	0.13	-1.2
3,830,912	+		Pf1N1B4_3438	0.13	+0.2
3,830,912	+		Pf1N1B4_3438	0.13	-2.0
3,830,912	+		Pf1N1B4_3438	0.13	+0.2
3,830,912	+		Pf1N1B4_3438	0.13	-1.2
3,830,913	-		Pf1N1B4_3438	0.13	+0.8
3,830,913	-		Pf1N1B4_3438	0.13	-0.4
3,830,913	-		Pf1N1B4_3438	0.13	-0.2
3,831,217	+		Pf1N1B4_3438	0.19	-0.2
3,831,217	+		Pf1N1B4_3438	0.19	-1.0
3,831,217	+				-0.8
3,831,217	+		Pf1N1B4_3438	0.19	-1.4