Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1306

Experiment: Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
1,488,195	+				-0.2
1,488,196	-				+3.4
1,488,219	+				-2.5
1,488,219	+				-0.1
1,488,219	+				-0.5
1,488,219	+				+0.5
1,488,219	+				+0.2
1,488,220	-				-0.8
1,488,220	-				-0.5
1,488,220	-				-0.4
1,488,220	-				+1.1
1,488,220	-				-2.0
1,488,286	+				-0.6
1,488,286	+				-0.8
1,488,286	+				-1.9
1,488,287	-				+0.1
1,488,291	-				-2.6
1,488,302	+				-1.9
1,488,302	+				+0.2
1,488,303	-				+3.8
1,488,303	-				-1.2
1,488,303	-				+1.8
1,488,356	+				+2.7
1,488,356	+				+0.2
1,488,357	-				-0.2
1,488,357	-				+1.4
1,488,427	+				-1.8
1,488,552	+				-0.1
1,488,570	+				+0.8
1,488,570	+				+1.4
1,488,570	+				+0.3
1,488,570	+				+1.1
1,488,586	+				+1.0
1,488,586	+				+0.2
1,488,587	-				+1.2
1,488,593	+				-0.1
1,488,593	+				-1.0
1,488,593	+				+0.1
1,488,593	+				+0.1
1,488,628	+				+1.5
1,488,628	+				+0.4
1,488,629	-				-1.8
1,488,629	-				-1.0
1,488,629	-				-0.3
1,488,632	+				-0.8
1,488,632	+				+1.7
1,488,632	+				-2.0
1,488,648	+				+1.1
1,488,648	+				+1.6
1,488,648	+				-0.0
1,488,648	+				+1.4
1,488,648	+				+1.5
1,488,648	+				-0.6
1,488,649	-				-2.8
1,488,649	-				-1.2
1,488,649	-				-1.2
1,488,649	-				+3.1
1,488,684	-				+0.5
1,488,718	+		Pf1N1B4_1305	0.19	-0.9
1,488,719	-		Pf1N1B4_1305	0.19	+2.4
1,488,719	-		Pf1N1B4_1305	0.19	+0.4
1,488,719	-		Pf1N1B4_1305	0.19	-2.3
1,488,772	+		Pf1N1B4_1305	0.34	+0.7
1,488,772	+		Pf1N1B4_1305	0.34	+0.1
1,488,772	+		Pf1N1B4_1305	0.34	+1.1
1,488,772	+		Pf1N1B4_1305	0.34	+3.0
1,488,772	+		Pf1N1B4_1305	0.34	-1.5
1,488,772	+		Pf1N1B4_1305	0.34	+0.8
1,488,772	+		Pf1N1B4_1305	0.34	+2.2
1,488,772	+		Pf1N1B4_1305	0.34	-0.8
1,488,772	+		Pf1N1B4_1305	0.34	-0.5
1,488,772	+		Pf1N1B4_1305	0.34	-1.5
1,488,772	+		Pf1N1B4_1305	0.34	-1.6
1,488,772	+		Pf1N1B4_1305	0.34	-2.6
1,488,772	+		Pf1N1B4_1305	0.34	-0.5
1,488,772	+		Pf1N1B4_1305	0.34	+0.2
1,488,772	+		Pf1N1B4_1305	0.34	-2.2
1,488,772	+		Pf1N1B4_1305	0.34	+0.4
1,488,772	+		Pf1N1B4_1305	0.34	-0.8
1,488,772	+		Pf1N1B4_1305	0.34	-0.8
1,488,772	+		Pf1N1B4_1305	0.34	-0.2
1,488,772	+		Pf1N1B4_1305	0.34	-0.9
1,488,772	+		Pf1N1B4_1305	0.34	-1.8
1,488,772	+		Pf1N1B4_1305	0.34	+0.6
1,488,772	+		Pf1N1B4_1305	0.34	-0.2
1,488,772	+		Pf1N1B4_1305	0.34	-0.6
1,488,772	+				+2.1
1,488,772	+		Pf1N1B4_1305	0.34	-2.0
1,488,772	+		Pf1N1B4_1305	0.34	-1.3
1,488,772	+		Pf1N1B4_1305	0.34	-0.3
1,488,772	+		Pf1N1B4_1305	0.34	-0.8
1,488,772	+		Pf1N1B4_1305	0.34	-0.5
1,488,773	-		Pf1N1B4_1305	0.34	-2.2
1,488,773	-		Pf1N1B4_1305	0.34	-0.4
1,488,773	-				-1.8
1,488,773	-		Pf1N1B4_1305	0.34	+0.6
1,488,773	-		Pf1N1B4_1305	0.34	+0.8
1,488,773	-		Pf1N1B4_1305	0.34	-0.2
1,488,773	-		Pf1N1B4_1305	0.34	-2.6
1,488,773	-		Pf1N1B4_1305	0.34	-1.9
1,488,773	-		Pf1N1B4_1305	0.34	+1.8
1,488,779	-		Pf1N1B4_1305	0.36	+1.1
1,488,806	+		Pf1N1B4_1305	0.43	-1.0
1,488,806	+		Pf1N1B4_1305	0.43	+1.1
1,488,806	+		Pf1N1B4_1305	0.43	+1.8
1,488,806	+		Pf1N1B4_1305	0.43	+0.8
1,488,913	+		Pf1N1B4_1305	0.73	-1.3
1,488,913	+		Pf1N1B4_1305	0.73	+1.1
1,488,913	+		Pf1N1B4_1305	0.73	+0.6
1,488,914	-		Pf1N1B4_1305	0.73	+1.8
1,488,914	-		Pf1N1B4_1305	0.73	+0.0
1,488,914	-		Pf1N1B4_1305	0.73	+2.7
1,488,914	-		Pf1N1B4_1305	0.73	+0.9
1,488,919	+				-1.2
1,488,945	+				+2.2
1,488,946	-		Pf1N1B4_1305	0.82	-0.2
1,488,946	-		Pf1N1B4_1305	0.82	-0.2
1,489,039	+				-0.8
1,489,039	+				-1.8
1,489,095	-				-1.3
1,489,095	-				-0.2
1,489,193	+				+1.1
1,489,193	+				-1.5
1,489,193	+				+0.2
1,489,194	-				-0.8
1,489,194	-				+0.4
1,489,194	-				+0.7
1,489,194	-				-1.8
1,489,194	-				-0.8
1,489,194	-				+0.5
1,489,194	-				+0.3
1,489,196	+				-1.4
1,489,196	+				-1.5
1,489,196	+				+2.7
1,489,196	+				-0.2
1,489,197	-				-0.3
1,489,197	-				+0.9
1,489,197	-				-0.6
1,489,197	-				-0.5
1,489,197	-				+1.0
1,489,197	-				-2.2
1,489,197	-				-2.6
1,489,197	-				+0.1
1,489,319	+				+1.1
1,489,319	+				-1.2
1,489,319	+				-1.5
1,489,320	-				-1.5
1,489,320	-				-0.3
1,489,369	+		Pf1N1B4_1306	0.12	-2.1
1,489,369	+		Pf1N1B4_1306	0.12	-1.2
1,489,370	-		Pf1N1B4_1306	0.12	-1.5
1,489,372	+		Pf1N1B4_1306	0.12	+1.2
1,489,372	+		Pf1N1B4_1306	0.12	+0.1
1,489,372	+		Pf1N1B4_1306	0.12	+2.6
1,489,372	+		Pf1N1B4_1306	0.12	-0.2
1,489,372	+		Pf1N1B4_1306	0.12	-1.0
1,489,372	+		Pf1N1B4_1306	0.12	-0.7
1,489,372	+		Pf1N1B4_1306	0.12	-2.7
1,489,372	+		Pf1N1B4_1306	0.12	-2.3
1,489,372	+		Pf1N1B4_1306	0.12	+0.2
1,489,372	+		Pf1N1B4_1306	0.12	-1.3
1,489,372	+		Pf1N1B4_1306	0.12	-1.0
1,489,372	+		Pf1N1B4_1306	0.12	+0.8
1,489,372	+		Pf1N1B4_1306	0.12	-1.8
1,489,372	+		Pf1N1B4_1306	0.12	-1.2
1,489,372	+		Pf1N1B4_1306	0.12	-0.8
1,489,372	+		Pf1N1B4_1306	0.12	+0.0
1,489,372	+		Pf1N1B4_1306	0.12	+1.2
1,489,373	-				+1.8
1,489,373	-		Pf1N1B4_1306	0.12	-2.0
1,489,373	-		Pf1N1B4_1306	0.12	-2.7
1,489,373	-		Pf1N1B4_1306	0.12	-1.0
1,489,373	-		Pf1N1B4_1306	0.12	-1.7
1,489,373	-		Pf1N1B4_1306	0.12	+0.6
1,489,373	-		Pf1N1B4_1306	0.12	+0.8
1,489,373	-		Pf1N1B4_1306	0.12	+0.2
1,489,373	-		Pf1N1B4_1306	0.12	+1.1
1,489,373	-		Pf1N1B4_1306	0.12	+1.8
1,489,373	-		Pf1N1B4_1306	0.12	+0.2
1,489,373	-		Pf1N1B4_1306	0.12	-0.0
1,489,373	-		Pf1N1B4_1306	0.12	-0.0
1,489,373	-		Pf1N1B4_1306	0.12	-0.3
1,489,373	-		Pf1N1B4_1306	0.12	-0.2
1,489,373	-		Pf1N1B4_1306	0.12	+0.6
1,489,373	-		Pf1N1B4_1306	0.12	+0.5
1,489,373	-		Pf1N1B4_1306	0.12	-2.2
1,489,373	-		Pf1N1B4_1306	0.12	+0.2
1,489,373	-		Pf1N1B4_1306	0.12	+1.1
1,489,373	-		Pf1N1B4_1306	0.12	+0.7
1,489,373	-		Pf1N1B4_1306	0.12	-0.5
1,489,373	-		Pf1N1B4_1306	0.12	-1.6
1,489,489	+		Pf1N1B4_1306	0.18	-1.6
1,489,490	-		Pf1N1B4_1306	0.19	+1.1
1,489,490	-		Pf1N1B4_1306	0.19	+0.3
1,489,508	+		Pf1N1B4_1306	0.20	-0.3
1,489,508	+		Pf1N1B4_1306	0.20	-0.6
1,489,508	+		Pf1N1B4_1306	0.20	-0.2
1,489,508	+		Pf1N1B4_1306	0.20	-0.3
1,489,508	+		Pf1N1B4_1306	0.20	-0.8
1,489,508	+		Pf1N1B4_1306	0.20	-0.3
1,489,508	+		Pf1N1B4_1306	0.20	+0.9
1,489,508	+		Pf1N1B4_1306	0.20	-2.9
1,489,508	+		Pf1N1B4_1306	0.20	-1.9
1,489,509	-		Pf1N1B4_1306	0.20	-0.9
1,489,509	-		Pf1N1B4_1306	0.20	-0.8
1,489,509	-		Pf1N1B4_1306	0.20	+0.6
1,489,509	-		Pf1N1B4_1306	0.20	-0.3
1,489,509	-		Pf1N1B4_1306	0.20	-1.5
1,489,509	-				-2.1
1,489,509	-		Pf1N1B4_1306	0.20	+0.5
1,489,509	-		Pf1N1B4_1306	0.20	-0.1
1,489,509	-		Pf1N1B4_1306	0.20	-2.5
1,489,509	-		Pf1N1B4_1306	0.20	-0.2
1,489,509	-		Pf1N1B4_1306	0.20	-0.3
1,489,540	-		Pf1N1B4_1306	0.21	+0.8
1,489,540	-		Pf1N1B4_1306	0.21	+0.7
1,489,555	+		Pf1N1B4_1306	0.22	-0.5
1,489,555	+		Pf1N1B4_1306	0.22	+0.4
1,489,555	+		Pf1N1B4_1306	0.22	+0.0
1,489,555	+		Pf1N1B4_1306	0.22	+0.0
1,489,555	+		Pf1N1B4_1306	0.22	-1.2
1,489,555	+		Pf1N1B4_1306	0.22	+0.4
1,489,555	+		Pf1N1B4_1306	0.22	-0.4
1,489,555	+		Pf1N1B4_1306	0.22	-1.0
1,489,556	-		Pf1N1B4_1306	0.22	+0.8
1,489,556	-		Pf1N1B4_1306	0.22	-2.3
1,489,556	-		Pf1N1B4_1306	0.22	+0.8
1,489,556	-		Pf1N1B4_1306	0.22	+0.1
1,489,556	-		Pf1N1B4_1306	0.22	-1.3
1,489,611	+		Pf1N1B4_1306	0.25	-1.0
1,489,611	+		Pf1N1B4_1306	0.25	-0.3
1,489,611	+		Pf1N1B4_1306	0.25	-0.1
1,489,611	+		Pf1N1B4_1306	0.25	+0.2
1,489,612	-		Pf1N1B4_1306	0.26	-1.2
1,489,763	+		Pf1N1B4_1306	0.34	+0.5
1,489,764	-				-1.8
1,489,789	+		Pf1N1B4_1306	0.36	-0.8
1,489,789	+		Pf1N1B4_1306	0.36	-1.8
1,489,789	+		Pf1N1B4_1306	0.36	+0.1
1,489,789	+		Pf1N1B4_1306	0.36	-0.8
1,489,789	+		Pf1N1B4_1306	0.36	+0.2
1,489,789	+		Pf1N1B4_1306	0.36	-2.3
1,489,789	+		Pf1N1B4_1306	0.36	-1.0
1,489,789	+		Pf1N1B4_1306	0.36	-0.8
1,489,789	+		Pf1N1B4_1306	0.36	-2.6
1,489,789	+		Pf1N1B4_1306	0.36	+1.8
1,489,789	+		Pf1N1B4_1306	0.36	-2.0
1,489,789	+		Pf1N1B4_1306	0.36	-0.6
1,489,789	+		Pf1N1B4_1306	0.36	+0.4
1,489,789	+		Pf1N1B4_1306	0.36	+1.1
1,489,789	+		Pf1N1B4_1306	0.36	-0.2
1,489,790	-		Pf1N1B4_1306	0.36	+0.2
1,489,790	-		Pf1N1B4_1306	0.36	-2.1
1,489,790	-		Pf1N1B4_1306	0.36	-0.4
1,489,790	-		Pf1N1B4_1306	0.36	-0.8
1,489,790	-		Pf1N1B4_1306	0.36	+0.9
1,489,790	-		Pf1N1B4_1306	0.36	+0.2
1,489,790	-		Pf1N1B4_1306	0.36	-0.5
1,489,919	+		Pf1N1B4_1306	0.43	+1.8
1,489,920	-		Pf1N1B4_1306	0.43	-1.9
1,489,920	-		Pf1N1B4_1306	0.43	-0.3
1,489,920	-		Pf1N1B4_1306	0.43	+1.2
1,489,943	+		Pf1N1B4_1306	0.45	-0.4
1,489,944	-		Pf1N1B4_1306	0.45	-0.7
1,489,944	-		Pf1N1B4_1306	0.45	-1.2
1,490,072	+		Pf1N1B4_1306	0.52	+0.1
1,490,101	+		Pf1N1B4_1306	0.54	+0.2
1,490,101	+		Pf1N1B4_1306	0.54	-1.2
1,490,101	+		Pf1N1B4_1306	0.54	+0.1
1,490,101	+		Pf1N1B4_1306	0.54	-1.2
1,490,101	+		Pf1N1B4_1306	0.54	+1.1
1,490,101	+		Pf1N1B4_1306	0.54	-0.8
1,490,101	+		Pf1N1B4_1306	0.54	+0.3
1,490,101	+		Pf1N1B4_1306	0.54	-1.3
1,490,101	+		Pf1N1B4_1306	0.54	-1.4
1,490,101	+		Pf1N1B4_1306	0.54	+0.1
1,490,101	+		Pf1N1B4_1306	0.54	-0.8
1,490,101	+		Pf1N1B4_1306	0.54	-0.9
1,490,101	+		Pf1N1B4_1306	0.54	-0.6
1,490,101	+		Pf1N1B4_1306	0.54	-0.5
1,490,101	+		Pf1N1B4_1306	0.54	-1.1
1,490,102	-		Pf1N1B4_1306	0.54	-1.0
1,490,102	-		Pf1N1B4_1306	0.54	-0.4
1,490,102	-		Pf1N1B4_1306	0.54	-0.7
1,490,102	-		Pf1N1B4_1306	0.54	-2.1
1,490,102	-		Pf1N1B4_1306	0.54	+0.4
1,490,102	-		Pf1N1B4_1306	0.54	-0.6
1,490,102	-		Pf1N1B4_1306	0.54	-1.2
1,490,102	-		Pf1N1B4_1306	0.54	-0.4
1,490,102	-		Pf1N1B4_1306	0.54	-0.7
1,490,236	+		Pf1N1B4_1306	0.61	+0.8
1,490,236	+		Pf1N1B4_1306	0.61	+5.3
1,490,236	+		Pf1N1B4_1306	0.61	-0.3
1,490,236	+		Pf1N1B4_1306	0.61	-1.0
1,490,236	+		Pf1N1B4_1306	0.61	-0.2
1,490,236	+		Pf1N1B4_1306	0.61	+0.7
1,490,236	+		Pf1N1B4_1306	0.61	-0.4
1,490,236	+		Pf1N1B4_1306	0.61	-1.0
1,490,237	-		Pf1N1B4_1306	0.61	+1.8
1,490,237	-		Pf1N1B4_1306	0.61	-1.2
1,490,237	-		Pf1N1B4_1306	0.61	-0.6
1,490,237	-		Pf1N1B4_1306	0.61	+0.2
1,490,359	-		Pf1N1B4_1306	0.68	+0.0
1,490,380	+		Pf1N1B4_1306	0.70	-0.8
1,490,380	+		Pf1N1B4_1306	0.70	-1.0
1,490,380	+		Pf1N1B4_1306	0.70	-1.2
1,490,381	-		Pf1N1B4_1306	0.70	+0.2
1,490,381	-		Pf1N1B4_1306	0.70	+0.5
1,490,382	+		Pf1N1B4_1306	0.70	-0.5
1,490,382	+		Pf1N1B4_1306	0.70	+0.2
1,490,382	+		Pf1N1B4_1306	0.70	-0.5
1,490,382	+		Pf1N1B4_1306	0.70	-0.5
1,490,383	-		Pf1N1B4_1306	0.70	+1.0
1,490,383	-		Pf1N1B4_1306	0.70	+0.4
1,490,434	+		Pf1N1B4_1306	0.73	+0.8
1,490,434	+		Pf1N1B4_1306	0.73	-1.1
1,490,434	+		Pf1N1B4_1306	0.73	-3.3
1,490,434	+		Pf1N1B4_1306	0.73	+0.2
1,490,435	-		Pf1N1B4_1306	0.73	-2.0
1,490,435	-		Pf1N1B4_1306	0.73	+0.5
1,490,435	-		Pf1N1B4_1306	0.73	+2.2
1,490,435	-		Pf1N1B4_1306	0.73	-0.2
1,490,435	-		Pf1N1B4_1306	0.73	-1.7
1,490,435	-		Pf1N1B4_1306	0.73	-0.2
1,490,453	-		Pf1N1B4_1306	0.74	-0.1
1,490,557	-		Pf1N1B4_1306	0.80	-0.5
1,490,773	+				+1.1
1,490,773	+				+0.6
1,490,774	-				+0.4
1,490,774	-				+0.0
1,490,781	-				+0.8
1,490,781	-				+1.5
1,490,781	-				+0.1
1,490,781	-				-0.4
1,490,781	-				-0.2
1,490,781	-				-1.3
1,490,781	-				+0.9
1,490,781	-				-0.4
1,490,921	+				+1.5
1,490,921	+				-0.6
1,491,059	+				+1.8
1,491,182	-		Pf1N1B4_1307	0.31	+1.2
1,491,282	+		Pf1N1B4_1307	0.53	-1.2
1,491,385	+		Pf1N1B4_1307	0.76	+0.8
1,491,385	+		Pf1N1B4_1307	0.76	-0.8
1,491,385	+		Pf1N1B4_1307	0.76	+0.7