Experiment: malate (C) and Ammonium chloride (N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02595 and PFLU_RS02600 are separated by 139 nucleotides PFLU_RS02600 and PFLU_RS02605 are separated by 108 nucleotides
PFLU_RS02595: PFLU_RS02595 - adenylosuccinate synthase, at 595,170 to 596,459
_RS02595
PFLU_RS02600: PFLU_RS02600 - methyl-accepting chemotaxis protein, at 596,599 to 598,533
_RS02600
PFLU_RS02605: PFLU_RS02605 - iron ABC transporter permease, at 598,642 to 600,207
_RS02605
Position (kb) 596
597
598
599 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 596.457 kb on + strand at 596.457 kb on + strand at 596.458 kb on - strand at 596.460 kb on + strand at 596.460 kb on + strand at 596.460 kb on + strand at 596.460 kb on + strand at 596.461 kb on - strand at 596.461 kb on - strand at 596.461 kb on - strand at 596.461 kb on - strand at 596.461 kb on - strand at 596.461 kb on - strand at 596.474 kb on - strand at 596.474 kb on - strand at 596.509 kb on + strand at 596.510 kb on - strand at 596.563 kb on - strand at 596.563 kb on - strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.621 kb on + strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.622 kb on - strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.657 kb on + strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.658 kb on - strand at 596.661 kb on + strand at 596.661 kb on + strand at 596.661 kb on + strand at 596.672 kb on + strand at 596.672 kb on + strand at 596.672 kb on + strand at 596.673 kb on - strand at 596.945 kb on + strand, within PFLU_RS02600 at 597.049 kb on + strand, within PFLU_RS02600 at 597.049 kb on + strand, within PFLU_RS02600 at 597.050 kb on - strand, within PFLU_RS02600 at 597.050 kb on - strand, within PFLU_RS02600 at 597.150 kb on + strand, within PFLU_RS02600 at 597.150 kb on + strand, within PFLU_RS02600 at 597.187 kb on + strand, within PFLU_RS02600 at 597.187 kb on + strand, within PFLU_RS02600 at 597.188 kb on - strand, within PFLU_RS02600 at 597.188 kb on - strand, within PFLU_RS02600 at 597.188 kb on - strand, within PFLU_RS02600 at 597.190 kb on + strand, within PFLU_RS02600 at 597.190 kb on + strand, within PFLU_RS02600 at 597.190 kb on + strand, within PFLU_RS02600 at 597.190 kb on + strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.191 kb on - strand, within PFLU_RS02600 at 597.500 kb on + strand, within PFLU_RS02600 at 597.501 kb on - strand, within PFLU_RS02600 at 597.501 kb on - strand, within PFLU_RS02600 at 597.501 kb on - strand, within PFLU_RS02600 at 597.506 kb on + strand, within PFLU_RS02600 at 597.506 kb on + strand, within PFLU_RS02600 at 597.506 kb on + strand, within PFLU_RS02600 at 597.506 kb on + strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.507 kb on - strand, within PFLU_RS02600 at 597.649 kb on - strand, within PFLU_RS02600 at 597.678 kb on + strand, within PFLU_RS02600 at 597.678 kb on + strand, within PFLU_RS02600 at 597.690 kb on + strand, within PFLU_RS02600 at 597.690 kb on + strand, within PFLU_RS02600 at 597.690 kb on + strand, within PFLU_RS02600 at 597.690 kb on + strand, within PFLU_RS02600 at 597.691 kb on - strand, within PFLU_RS02600 at 597.691 kb on - strand, within PFLU_RS02600 at 597.723 kb on + strand, within PFLU_RS02600 at 598.197 kb on + strand, within PFLU_RS02600 at 598.197 kb on + strand, within PFLU_RS02600 at 598.198 kb on - strand, within PFLU_RS02600 at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.531 kb on + strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.532 kb on - strand at 598.534 kb on + strand at 598.534 kb on + strand at 598.534 kb on + strand at 598.535 kb on - strand at 598.535 kb on - strand at 598.579 kb on + strand at 598.579 kb on + strand at 598.579 kb on + strand at 598.579 kb on + strand at 598.579 kb on + strand at 598.579 kb on + strand at 598.655 kb on + strand at 598.655 kb on + strand at 598.655 kb on + strand at 598.655 kb on + strand at 598.655 kb on + strand at 598.655 kb on + strand at 598.655 kb on + strand at 598.656 kb on - strand at 598.656 kb on - strand at 598.656 kb on - strand at 598.656 kb on - strand at 598.656 kb on - strand at 598.656 kb on - strand at 598.656 kb on - strand at 598.676 kb on + strand at 598.677 kb on - strand at 598.677 kb on - strand at 598.699 kb on + strand at 598.699 kb on + strand at 598.699 kb on + strand at 598.699 kb on + strand at 598.699 kb on + strand at 598.699 kb on + strand at 598.699 kb on + strand at 598.700 kb on - strand at 598.716 kb on - strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.776 kb on + strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.777 kb on - strand at 598.872 kb on + strand, within PFLU_RS02605 at 598.884 kb on + strand, within PFLU_RS02605 at 598.884 kb on + strand, within PFLU_RS02605 at 598.993 kb on + strand, within PFLU_RS02605 at 599.039 kb on + strand, within PFLU_RS02605 at 599.039 kb on + strand, within PFLU_RS02605 at 599.040 kb on - strand, within PFLU_RS02605 at 599.040 kb on - strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.054 kb on + strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.055 kb on - strand, within PFLU_RS02605 at 599.069 kb on + strand, within PFLU_RS02605 at 599.069 kb on + strand, within PFLU_RS02605 at 599.069 kb on + strand, within PFLU_RS02605 at 599.069 kb on + strand, within PFLU_RS02605 at 599.069 kb on + strand, within PFLU_RS02605 at 599.070 kb on - strand, within PFLU_RS02605 at 599.070 kb on - strand, within PFLU_RS02605 at 599.070 kb on - strand, within PFLU_RS02605 at 599.070 kb on - strand, within PFLU_RS02605 at 599.070 kb on - strand, within PFLU_RS02605 at 599.117 kb on + strand, within PFLU_RS02605 at 599.117 kb on + strand, within PFLU_RS02605 at 599.117 kb on + strand, within PFLU_RS02605 at 599.118 kb on - strand, within PFLU_RS02605 at 599.118 kb on - strand, within PFLU_RS02605 at 599.191 kb on + strand, within PFLU_RS02605 at 599.191 kb on + strand, within PFLU_RS02605 at 599.351 kb on + strand, within PFLU_RS02605 at 599.351 kb on + strand, within PFLU_RS02605 at 599.351 kb on + strand, within PFLU_RS02605 at 599.351 kb on + strand, within PFLU_RS02605 at 599.351 kb on + strand, within PFLU_RS02605 at 599.352 kb on - strand, within PFLU_RS02605 at 599.352 kb on - strand, within PFLU_RS02605 at 599.352 kb on - strand, within PFLU_RS02605 at 599.352 kb on - strand, within PFLU_RS02605 at 599.452 kb on + strand, within PFLU_RS02605 at 599.464 kb on + strand, within PFLU_RS02605 at 599.464 kb on + strand, within PFLU_RS02605 at 599.464 kb on + strand, within PFLU_RS02605
Per-strain Table
Position Strand Gene LocusTag Fraction malate (C) and Ammonium chloride (N); with TAPS remove 596,457 + -0.7 596,457 + +0.3 596,458 - +2.0 596,460 + +0.6 596,460 + -1.1 596,460 + -1.4 596,460 + +0.2 596,461 - +0.7 596,461 - +1.1 596,461 - -0.2 596,461 - -0.2 596,461 - +1.0 596,461 - +1.7 596,474 - +1.7 596,474 - -0.8 596,509 + -0.2 596,510 - +0.4 596,563 - +1.0 596,563 - +0.2 596,621 + +1.3 596,621 + +0.8 596,621 + +2.0 596,621 + +1.7 596,621 + +2.0 596,621 + -0.4 596,621 + -1.7 596,621 + +1.5 596,622 - +0.6 596,622 - +0.1 596,622 - -1.5 596,622 - +1.0 596,622 - -0.6 596,622 - +1.6 596,622 - +1.1 596,622 - +1.4 596,657 + -2.3 596,657 + +0.7 596,657 + +0.5 596,657 + +1.2 596,657 + -1.7 596,657 + -2.2 596,657 + +1.3 596,657 + +0.7 596,657 + +1.6 596,657 + -0.4 596,657 + +1.4 596,657 + -1.8 596,658 - -1.6 596,658 - -1.3 596,658 - -0.9 596,658 - -2.0 596,658 - +1.6 596,658 - -1.6 596,658 - +0.5 596,658 - +2.3 596,658 - +2.2 596,658 - +0.2 596,658 - +2.1 596,658 - +0.7 596,661 + -1.3 596,661 + -1.0 596,661 + +0.3 596,672 + +2.4 596,672 + +1.5 596,672 + +1.3 596,673 - -1.9 596,945 + PFLU_RS02600 0.18 -2.9 597,049 + PFLU_RS02600 0.23 +0.3 597,049 + PFLU_RS02600 0.23 +0.6 597,050 - PFLU_RS02600 0.23 +0.5 597,050 - PFLU_RS02600 0.23 -0.9 597,150 + PFLU_RS02600 0.28 -1.1 597,150 + PFLU_RS02600 0.28 -1.5 597,187 + PFLU_RS02600 0.30 -1.4 597,187 + PFLU_RS02600 0.30 -0.1 597,188 - PFLU_RS02600 0.30 -0.2 597,188 - PFLU_RS02600 0.30 +1.4 597,188 - PFLU_RS02600 0.30 -0.6 597,190 + PFLU_RS02600 0.31 -0.3 597,190 + PFLU_RS02600 0.31 +2.5 597,190 + PFLU_RS02600 0.31 -2.7 597,190 + PFLU_RS02600 0.31 -1.0 597,191 - PFLU_RS02600 0.31 +1.8 597,191 - PFLU_RS02600 0.31 -1.8 597,191 - PFLU_RS02600 0.31 +1.6 597,191 - PFLU_RS02600 0.31 +0.6 597,191 - PFLU_RS02600 0.31 -2.4 597,191 - PFLU_RS02600 0.31 +0.7 597,191 - PFLU_RS02600 0.31 -2.8 597,191 - PFLU_RS02600 0.31 -2.1 597,191 - PFLU_RS02600 0.31 +1.0 597,500 + PFLU_RS02600 0.47 -3.1 597,501 - PFLU_RS02600 0.47 -1.9 597,501 - PFLU_RS02600 0.47 +1.1 597,501 - PFLU_RS02600 0.47 -2.0 597,506 + PFLU_RS02600 0.47 -0.8 597,506 + PFLU_RS02600 0.47 -1.5 597,506 + PFLU_RS02600 0.47 -2.8 597,506 + PFLU_RS02600 0.47 -2.2 597,507 - PFLU_RS02600 0.47 -0.2 597,507 - PFLU_RS02600 0.47 -0.6 597,507 - PFLU_RS02600 0.47 -1.4 597,507 - PFLU_RS02600 0.47 +1.6 597,507 - PFLU_RS02600 0.47 +1.6 597,507 - PFLU_RS02600 0.47 -1.0 597,507 - PFLU_RS02600 0.47 +0.7 597,507 - PFLU_RS02600 0.47 +1.2 597,507 - PFLU_RS02600 0.47 -0.2 597,507 - PFLU_RS02600 0.47 +0.4 597,507 - PFLU_RS02600 0.47 +0.2 597,507 - PFLU_RS02600 0.47 -0.6 597,507 - PFLU_RS02600 0.47 +1.6 597,507 - PFLU_RS02600 0.47 +0.8 597,649 - PFLU_RS02600 0.54 -2.5 597,678 + PFLU_RS02600 0.56 -1.9 597,678 + PFLU_RS02600 0.56 -1.5 597,690 + PFLU_RS02600 0.56 +1.9 597,690 + PFLU_RS02600 0.56 +3.0 597,690 + PFLU_RS02600 0.56 -0.6 597,690 + PFLU_RS02600 0.56 -1.2 597,691 - PFLU_RS02600 0.56 -0.6 597,691 - PFLU_RS02600 0.56 +0.5 597,723 + PFLU_RS02600 0.58 -3.1 598,197 + PFLU_RS02600 0.83 -1.9 598,197 + PFLU_RS02600 0.83 +0.7 598,198 - PFLU_RS02600 0.83 +1.5 598,531 + -0.3 598,531 + +0.2 598,531 + +2.2 598,531 + +0.8 598,531 + +0.1 598,531 + -1.2 598,531 + -0.7 598,531 + +1.9 598,531 + +0.5 598,532 - -1.8 598,532 - +0.9 598,532 - -2.0 598,532 - +0.3 598,532 - -0.7 598,532 - -0.4 598,532 - +0.7 598,532 - -2.0 598,532 - +0.3 598,534 + +0.5 598,534 + +1.1 598,534 + -1.7 598,535 - -0.0 598,535 - +0.0 598,579 + -3.0 598,579 + -1.0 598,579 + +0.4 598,579 + -1.0 598,579 + +0.9 598,579 + +0.9 598,655 + +1.7 598,655 + +0.6 598,655 + +0.7 598,655 + +2.4 598,655 + +0.8 598,655 + +0.2 598,655 + -0.2 598,656 - -1.8 598,656 - -1.5 598,656 - -1.4 598,656 - +0.2 598,656 - +0.3 598,656 - -2.5 598,656 - -2.0 598,676 + -3.3 598,677 - +0.5 598,677 - -0.2 598,699 + -2.1 598,699 + +2.0 598,699 + -1.9 598,699 + +1.4 598,699 + +1.0 598,699 + +2.1 598,699 + -0.9 598,700 - +1.2 598,716 - -1.8 598,776 + +0.3 598,776 + +0.3 598,776 + -1.3 598,776 + +2.9 598,776 + +0.8 598,776 + +1.2 598,776 + +0.5 598,776 + +0.7 598,777 - +0.6 598,777 - +1.6 598,777 - -1.2 598,777 - +0.7 598,777 - +1.4 598,777 - -1.4 598,777 - -0.6 598,777 - +0.6 598,872 + PFLU_RS02605 0.15 -1.6 598,884 + PFLU_RS02605 0.15 -2.8 598,884 + PFLU_RS02605 0.15 -1.2 598,993 + PFLU_RS02605 0.22 -2.1 599,039 + PFLU_RS02605 0.25 +0.6 599,039 + PFLU_RS02605 0.25 -1.6 599,040 - PFLU_RS02605 0.25 +0.2 599,040 - PFLU_RS02605 0.25 +1.1 599,054 + PFLU_RS02605 0.26 -2.2 599,054 + PFLU_RS02605 0.26 +0.9 599,054 + PFLU_RS02605 0.26 -3.4 599,054 + PFLU_RS02605 0.26 -0.9 599,054 + PFLU_RS02605 0.26 +0.4 599,054 + PFLU_RS02605 0.26 -1.4 599,054 + PFLU_RS02605 0.26 +0.7 599,054 + PFLU_RS02605 0.26 -1.8 599,054 + PFLU_RS02605 0.26 -1.3 599,055 - PFLU_RS02605 0.26 -2.1 599,055 - PFLU_RS02605 0.26 -2.4 599,055 - PFLU_RS02605 0.26 -0.9 599,055 - PFLU_RS02605 0.26 -0.9 599,055 - PFLU_RS02605 0.26 -0.3 599,055 - PFLU_RS02605 0.26 -1.7 599,055 - PFLU_RS02605 0.26 +1.0 599,055 - PFLU_RS02605 0.26 +2.4 599,055 - PFLU_RS02605 0.26 +0.3 599,055 - PFLU_RS02605 0.26 -0.3 599,055 - PFLU_RS02605 0.26 +1.4 599,055 - PFLU_RS02605 0.26 -2.8 599,055 - PFLU_RS02605 0.26 +1.4 599,055 - PFLU_RS02605 0.26 +1.1 599,069 + PFLU_RS02605 0.27 +0.2 599,069 + PFLU_RS02605 0.27 +1.2 599,069 + PFLU_RS02605 0.27 -2.0 599,069 + PFLU_RS02605 0.27 +0.1 599,069 + PFLU_RS02605 0.27 +1.2 599,070 - PFLU_RS02605 0.27 +2.4 599,070 - PFLU_RS02605 0.27 -1.4 599,070 - PFLU_RS02605 0.27 -0.6 599,070 - PFLU_RS02605 0.27 -0.3 599,070 - PFLU_RS02605 0.27 -1.3 599,117 + PFLU_RS02605 0.30 -1.2 599,117 + PFLU_RS02605 0.30 +1.3 599,117 + PFLU_RS02605 0.30 +0.2 599,118 - PFLU_RS02605 0.30 -0.1 599,118 - PFLU_RS02605 0.30 +0.8 599,191 + PFLU_RS02605 0.35 +0.6 599,191 + PFLU_RS02605 0.35 +2.2 599,351 + PFLU_RS02605 0.45 -0.7 599,351 + PFLU_RS02605 0.45 +1.2 599,351 + PFLU_RS02605 0.45 -2.0 599,351 + PFLU_RS02605 0.45 -0.3 599,351 + PFLU_RS02605 0.45 +2.1 599,352 - PFLU_RS02605 0.45 +1.0 599,352 - PFLU_RS02605 0.45 +0.3 599,352 - PFLU_RS02605 0.45 -0.5 599,352 - PFLU_RS02605 0.45 +2.2 599,452 + PFLU_RS02605 0.52 -1.0 599,464 + PFLU_RS02605 0.52 +1.3 599,464 + PFLU_RS02605 0.52 -0.0 599,464 + PFLU_RS02605 0.52 +0.7
Or see this region's nucleotide sequence