Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5379

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
112,088	+		Pf1N1B4_5378	0.84	-1.2
112,088	+		Pf1N1B4_5378	0.84	+1.5
112,088	+		Pf1N1B4_5378	0.84	-0.1
112,088	+		Pf1N1B4_5378	0.84	+1.7
112,088	+		Pf1N1B4_5378	0.84	-2.3
112,088	+				-1.3
112,089	-		Pf1N1B4_5378	0.84	+0.5
112,089	-		Pf1N1B4_5378	0.84	+1.7
112,089	-		Pf1N1B4_5378	0.84	+1.3
112,089	-		Pf1N1B4_5378	0.84	-1.4
112,089	-		Pf1N1B4_5378	0.84	+2.4
112,332	+				-1.9
112,332	+				+2.0
112,333	-				-0.5
112,333	-				-1.5
112,333	-				-0.5
112,347	+				-0.2
112,347	+				-0.5
112,347	+				+3.1
112,347	+				-1.0
112,348	-				+0.5
112,348	-				+0.1
112,348	-				-0.5
112,348	-				-1.1
112,348	-				-1.1
112,348	-				-0.2
112,348	-				-1.0
112,348	-				+1.2
112,386	-				+0.1
112,427	+				-0.6
112,427	+				-1.9
112,431	+				+0.3
112,431	+				-1.1
112,431	+				-0.1
112,431	+				-0.5
112,431	+				-0.2
112,431	+				+0.9
112,431	+				-0.3
112,432	-				-0.4
112,432	-				+0.5
112,432	-				-0.1
112,432	-				-2.1
112,432	-				+0.2
112,432	-				+0.7
112,570	+				+0.5
112,570	+				-0.9
112,570	+				-0.2
112,571	-				-0.9
112,571	-				+0.5
112,636	+				-0.9
112,636	+				-0.5
112,649	+				+1.1
112,649	+				-1.5
112,650	-				-0.5
112,650	-				+0.3
112,650	-				+0.1
112,686	+				+1.1
112,686	+				+0.1
112,686	+				-0.3
112,687	-				-0.3
112,687	-				+2.8
112,843	+				+1.3
112,870	+				+1.0
112,871	-				+0.9
112,871	-				+0.2
112,903	+				-1.1
112,903	+				-1.4
112,903	+				-0.6
112,904	-				+1.9
112,904	-				-0.3
112,904	-				+0.4
112,904	-				-0.3
112,904	-				-3.2
112,912	+				+1.1
112,913	-				+0.2
112,913	-				-1.3
113,038	+				+0.7
113,038	+				-2.1
113,038	+				+0.4
113,038	+				-1.5
113,039	-				-0.9
113,133	+		Pf1N1B4_5379	0.29	+1.5
113,156	+		Pf1N1B4_5379	0.36	-0.5
113,360	+				-1.0
113,360	+				+3.2
113,361	-				+1.1
113,372	+				+0.5
113,407	+				-2.0
113,428	-				-0.5
113,629	+		Pf1N1B4_5380	0.33	-0.1
113,629	+		Pf1N1B4_5380	0.33	+0.4
113,629	+		Pf1N1B4_5380	0.33	+0.5
113,629	+				+0.1
113,630	-		Pf1N1B4_5380	0.33	+0.9
113,632	+		Pf1N1B4_5380	0.34	+0.1
113,632	+		Pf1N1B4_5380	0.34	-1.5
113,633	-		Pf1N1B4_5380	0.34	+1.6
113,633	-		Pf1N1B4_5380	0.34	-1.4
113,659	+		Pf1N1B4_5380	0.40	-0.1
113,659	+		Pf1N1B4_5380	0.40	+0.3
113,659	+		Pf1N1B4_5380	0.40	-0.6
113,659	+		Pf1N1B4_5380	0.40	+1.5
113,660	-				+1.1
113,682	+		Pf1N1B4_5380	0.45	+0.2
113,721	+		Pf1N1B4_5380	0.54	-0.3
113,758	+		Pf1N1B4_5380	0.63	-0.5
113,944	+				+0.5
113,944	+				-1.8
113,944	+				-1.1
113,944	+				+0.9
114,012	+				-0.6
114,012	+				+1.0
114,012	+				-2.3
114,012	+				+0.3
114,012	+				-1.9
114,012	+				+0.9
114,012	+				-0.6
114,013	-				-0.1
114,013	-				+0.1
114,013	-				+0.5
114,035	+				-0.9
114,101	+				-1.9
114,109	-				+2.5
114,143	+				+0.5
114,143	+				+1.5
114,143	+				-0.3
114,143	+				-0.1
114,143	+				+0.1
114,143	+				-3.1
114,143	+				+0.1
114,143	+				-0.1
114,143	+				+0.5
114,143	+				-0.6
114,143	+				-0.0
114,143	+				-0.9
114,143	+				+1.0
114,143	+				+0.1
114,143	+				+0.5
114,143	+				-0.5
114,143	+				-1.1
114,144	-				+0.1
114,144	-				-1.5
114,144	-				-0.3
114,147	+				-0.6
114,147	+				+0.6
114,147	+				+1.5
114,147	+				+0.1
114,147	+				-0.9
114,147	+				-1.1
114,147	+				-2.0
114,147	+				+2.1
114,147	+				-0.1
114,147	+				-1.1
114,147	+				+1.7
114,148	-				+0.2
114,148	-				-0.5
114,148	-				-0.7
114,148	-				+0.1
114,163	+				+0.9
114,163	+				-0.8
114,163	+				-0.1
114,164	-				+0.5
114,181	+				-1.1
114,181	+				-0.6
114,281	+		Pf1N1B4_5381	0.35	-1.6
114,286	+		Pf1N1B4_5381	0.37	+1.5
114,286	+		Pf1N1B4_5381	0.37	-1.5
114,320	+		Pf1N1B4_5381	0.49	-0.5
114,321	-		Pf1N1B4_5381	0.49	-3.0
114,343	+				-1.3
114,343	+		Pf1N1B4_5381	0.57	+0.2
114,343	+		Pf1N1B4_5381	0.57	-0.9
114,343	+		Pf1N1B4_5381	0.57	+0.9
114,343	+		Pf1N1B4_5381	0.57	+0.5
114,343	+		Pf1N1B4_5381	0.57	+0.5
114,343	+		Pf1N1B4_5381	0.57	-0.5
114,343	+		Pf1N1B4_5381	0.57	-0.3
114,343	+		Pf1N1B4_5381	0.57	-0.5