Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5378

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
110,154	-		Pf1N1B4_5377	0.28	-1.2
110,170	+		Pf1N1B4_5377	0.31	-0.0
110,263	-		Pf1N1B4_5377	0.50	-0.4
110,289	-		Pf1N1B4_5377	0.55	-1.0
110,390	+		Pf1N1B4_5377	0.75	-2.4
110,391	-		Pf1N1B4_5377	0.76	-0.3
110,494	-				-2.1
110,494	-				-0.2
110,494	-				+1.3
110,580	+				-0.2
110,581	-				-1.1
110,605	+				-1.3
110,605	+				-0.0
110,605	+				-1.0
110,605	+				+0.7
110,605	+				+0.0
110,605	+				-0.9
110,606	-				+0.3
110,606	-				-0.1
110,606	-				-1.0
110,606	-				+0.1
110,606	-				-1.1
110,606	-				-0.9
110,606	-				-1.5
110,606	-				+0.4
110,606	-				-0.2
110,609	+				-0.2
110,609	+				-1.5
110,609	+				+1.0
110,609	+				+0.9
110,610	-				-0.7
110,610	-				+0.2
110,653	+				-1.3
110,653	+				+2.5
110,653	+				-1.0
110,654	-				-0.9
110,654	-				-2.2
110,689	+				-2.2
110,690	-				-1.5
110,697	+				+0.7
110,697	+				-1.5
110,697	+				-0.1
110,698	-				+0.2
110,698	-				-0.7
110,698	-				+2.0
110,698	-				-2.1
111,110	+				-0.7
111,110	+				+1.1
111,111	-				-1.7
111,111	-				-0.5
111,111	-				-0.5
111,111	-				-1.8
111,111	-				-0.5
111,536	-				-0.1
111,536	-				-0.1
111,625	-		Pf1N1B4_5378	0.45	+1.1
112,088	+		Pf1N1B4_5378	0.84	-1.2
112,088	+		Pf1N1B4_5378	0.84	+1.5
112,088	+		Pf1N1B4_5378	0.84	-0.1
112,088	+		Pf1N1B4_5378	0.84	+1.7
112,088	+		Pf1N1B4_5378	0.84	-2.3
112,088	+				-1.3
112,089	-		Pf1N1B4_5378	0.84	+0.5
112,089	-		Pf1N1B4_5378	0.84	+1.7
112,089	-		Pf1N1B4_5378	0.84	+1.3
112,089	-		Pf1N1B4_5378	0.84	-1.4
112,089	-		Pf1N1B4_5378	0.84	+2.4
112,332	+				-1.9
112,332	+				+2.0
112,333	-				-0.5
112,333	-				-1.5
112,333	-				-0.5
112,347	+				-0.2
112,347	+				-0.5
112,347	+				+3.1
112,347	+				-1.0
112,348	-				+0.5
112,348	-				+0.1
112,348	-				-0.5
112,348	-				-1.1
112,348	-				-1.1
112,348	-				-0.2
112,348	-				-1.0
112,348	-				+1.2
112,386	-				+0.1
112,427	+				-0.6
112,427	+				-1.9
112,431	+				+0.3
112,431	+				-1.1
112,431	+				-0.1
112,431	+				-0.5
112,431	+				-0.2
112,431	+				+0.9
112,431	+				-0.3
112,432	-				-0.4
112,432	-				+0.5
112,432	-				-0.1
112,432	-				-2.1
112,432	-				+0.2
112,432	-				+0.7
112,570	+				+0.5
112,570	+				-0.9
112,570	+				-0.2
112,571	-				-0.9
112,571	-				+0.5
112,636	+				-0.9
112,636	+				-0.5
112,649	+				+1.1
112,649	+				-1.5
112,650	-				-0.5
112,650	-				+0.3
112,650	-				+0.1
112,686	+				+1.1
112,686	+				+0.1
112,686	+				-0.3
112,687	-				-0.3
112,687	-				+2.8
112,843	+				+1.3
112,870	+				+1.0
112,871	-				+0.9
112,871	-				+0.2
112,903	+				-1.1
112,903	+				-1.4
112,903	+				-0.6
112,904	-				+1.9
112,904	-				-0.3
112,904	-				+0.4
112,904	-				-0.3
112,904	-				-3.2
112,912	+				+1.1
112,913	-				+0.2
112,913	-				-1.3
113,038	+				+0.7
113,038	+				-2.1
113,038	+				+0.4
113,038	+				-1.5
113,039	-				-0.9
113,133	+		Pf1N1B4_5379	0.29	+1.5
113,156	+		Pf1N1B4_5379	0.36	-0.5