Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5261

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
20,274	-		Pf1N1B4_5260	0.63	-0.1
20,277	+				+1.5
20,281	+		Pf1N1B4_5260	0.64	-0.1
20,285	-		Pf1N1B4_5260	0.64	+1.5
20,627	+				-1.9
20,627	+				-0.8
20,630	+				+1.8
20,657	+				-0.5
20,758	+				+0.9
20,977	+				-1.5
20,977	+				-0.6
21,099	+		Pf1N1B4_5261	0.62	+2.0
21,100	-		Pf1N1B4_5261	0.63	-0.3
21,100	-		Pf1N1B4_5261	0.63	-0.5
21,100	-		Pf1N1B4_5261	0.63	+1.1
21,200	+				+0.6
21,220	+				-1.3
21,359	+				-0.1
21,360	-				-1.0
21,589	+				+2.0
21,724	+		Pf1N1B4_5262	0.36	-0.2
21,725	-		Pf1N1B4_5262	0.37	-0.4
21,904	+		Pf1N1B4_5262	0.73	-0.9
21,904	+		Pf1N1B4_5262	0.73	-0.7
21,904	+		Pf1N1B4_5262	0.73	-0.4
21,905	-		Pf1N1B4_5262	0.73	-0.5
21,905	-		Pf1N1B4_5262	0.73	-0.9
21,905	-		Pf1N1B4_5262	0.73	-1.4
21,905	-		Pf1N1B4_5262	0.73	+1.5
21,941	+		Pf1N1B4_5262	0.81	-3.2
21,941	+		Pf1N1B4_5262	0.81	-0.9
21,943	+		Pf1N1B4_5262	0.81	+1.3
21,944	-		Pf1N1B4_5262	0.81	-0.5
21,944	-		Pf1N1B4_5262	0.81	+1.0
21,961	+		Pf1N1B4_5262	0.85	-0.1
22,078	-				+0.7
22,104	+				-0.3
22,105	-				-1.5
22,105	-				-0.9
22,159	+				-0.7
22,159	+				-0.5
22,160	-				+0.2
22,162	+				-1.3
22,162	+				-0.9
22,162	+				-0.8
22,162	+				+1.5
22,162	+				+0.3