Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5151

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
5,737,484	+				+0.5
5,737,685	-				-0.8
5,737,691	-				-2.5
5,737,832	+				+0.7
5,737,838	-				-0.8
5,737,976	+				-0.8
5,737,983	-				-0.8
5,737,988	+				-0.4
5,738,088	-				-2.2
5,738,114	+				-0.4
5,738,115	-				-1.4
5,738,129	-				+0.8
5,738,374	+				-0.0
5,738,374	+				+0.8
5,738,375	-				+0.6
5,738,375	-				+0.1
5,738,446	-				-0.2
5,738,671	-		Pf1N1B4_5151	0.43	-1.2
5,738,803	+		Pf1N1B4_5151	0.63	+0.6
5,738,803	+		Pf1N1B4_5151	0.63	-0.2
5,738,803	+		Pf1N1B4_5151	0.63	-1.9
5,738,804	-		Pf1N1B4_5151	0.63	-0.9
5,738,905	+		Pf1N1B4_5151	0.78	-0.3
5,738,948	-		Pf1N1B4_5151	0.85	-1.9
5,739,007	+				-0.8
5,739,008	-				-1.4
5,739,096	-				-1.3
5,739,145	-				+0.2
5,739,183	-				-0.9
5,739,291	+				-1.1
5,739,615	+				-0.0
5,739,616	-		Pf1N1B4_5152	0.44	-0.8
5,739,616	-		Pf1N1B4_5152	0.44	-0.4
5,739,616	-		Pf1N1B4_5152	0.44	-0.3
5,739,690	+		Pf1N1B4_5152	0.52	+0.7
5,739,691	-				+1.0
5,739,989	+				-1.4
5,739,990	-		Pf1N1B4_5152	0.85	-0.0
5,740,034	+				-2.1
5,740,034	+				-0.1