Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4414

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,876,757	-		Pf1N1B4_4413	0.46	+0.1
4,876,836	-		Pf1N1B4_4413	0.52	-0.4
4,876,914	-		Pf1N1B4_4413	0.58	-1.8
4,876,914	-				-0.2
4,877,047	+		Pf1N1B4_4413	0.68	+0.3
4,877,047	+				+2.2
4,877,048	-		Pf1N1B4_4413	0.68	-0.1
4,877,050	+		Pf1N1B4_4413	0.68	-1.4
4,877,575	-				-0.3
4,877,575	-				-0.0
4,877,575	-				-1.4
4,877,640	+		Pf1N1B4_4414	0.22	-0.8
4,877,640	+				-1.0
4,877,641	-		Pf1N1B4_4414	0.22	+1.8
4,877,686	-				+1.0
4,877,730	+				-1.6
4,877,731	-		Pf1N1B4_4414	0.41	+0.7
4,877,731	-		Pf1N1B4_4414	0.41	+2.2
4,877,746	+		Pf1N1B4_4414	0.44	-0.3
4,877,794	+		Pf1N1B4_4414	0.54	+0.3
4,877,795	-		Pf1N1B4_4414	0.54	+2.6
4,878,078	+				+0.1
4,878,078	+				+1.6
4,878,078	+				+0.4
4,878,079	-				-0.8
4,878,080	+				-0.1
4,878,080	+				-1.0
4,878,080	+				-0.2
4,878,081	-				+0.1
4,878,081	-				+0.2
4,878,081	-				-0.1
4,878,081	-				+1.9
4,878,114	-				-0.0
4,878,135	+				-1.1
4,878,136	-				-1.4
4,878,138	-				-0.8
4,878,260	+		Pf1N1B4_4415	0.14	-0.2
4,878,261	-		Pf1N1B4_4415	0.14	+0.8
4,878,418	+				+0.6
4,878,418	+		Pf1N1B4_4415	0.53	+0.1
4,878,523	-				-1.0
4,878,602	-				+0.2
4,878,602	-				+0.3
4,878,611	+				-1.2
4,878,611	+				-0.5
4,878,611	+				-0.4
4,878,612	-				+0.3
4,878,691	+				+0.2
4,878,692	-				-0.4
4,878,693	+				+0.3
4,878,807	+				+0.8
4,878,921	+				-2.2
4,878,922	-				-1.7