Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4241

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,698,726	+		Pf1N1B4_4239	0.55	+0.2
4,698,727	-		Pf1N1B4_4239	0.55	-2.1
4,698,732	+				+0.6
4,698,733	-		Pf1N1B4_4239	0.56	+0.2
4,698,733	-		Pf1N1B4_4239	0.56	-0.4
4,698,873	+		Pf1N1B4_4239	0.81	-0.6
4,698,873	+		Pf1N1B4_4239	0.81	+0.6
4,698,873	+				-0.0
4,698,874	-		Pf1N1B4_4239	0.81	-1.0
4,698,880	-		Pf1N1B4_4239	0.82	-0.7
4,699,076	+				-0.8
4,699,109	-				-2.0
4,699,115	+				-1.1
4,699,165	-		Pf1N1B4_4240	0.34	-0.8
4,699,168	+		Pf1N1B4_4240	0.36	-0.3
4,699,169	-		Pf1N1B4_4240	0.37	+0.2
4,699,281	+				-0.1
4,699,282	-				-0.8
4,699,520	+				+0.3
4,699,649	+		Pf1N1B4_4241	0.13	+2.7
4,699,653	+		Pf1N1B4_4241	0.13	+1.0
4,699,653	+		Pf1N1B4_4241	0.13	-1.9
4,699,653	+		Pf1N1B4_4241	0.13	-0.0
4,699,655	+		Pf1N1B4_4241	0.13	+1.0
4,699,655	+				-0.8
4,699,655	+		Pf1N1B4_4241	0.13	+1.5
4,699,655	+		Pf1N1B4_4241	0.13	+1.2
4,699,656	-		Pf1N1B4_4241	0.13	-0.8
4,699,664	+		Pf1N1B4_4241	0.14	+1.1
4,699,664	+		Pf1N1B4_4241	0.14	-0.8
4,699,664	+		Pf1N1B4_4241	0.14	+1.0
4,699,665	-		Pf1N1B4_4241	0.14	+0.9
4,699,665	-		Pf1N1B4_4241	0.14	+1.0
4,699,665	-		Pf1N1B4_4241	0.14	-1.4
4,699,799	+		Pf1N1B4_4241	0.30	+0.8
4,699,799	+		Pf1N1B4_4241	0.30	-1.3
4,699,819	+		Pf1N1B4_4241	0.32	-0.9
4,700,087	+		Pf1N1B4_4241	0.62	+0.3
4,700,088	-		Pf1N1B4_4241	0.62	+0.6
4,700,201	+		Pf1N1B4_4241	0.75	+1.0
4,700,210	+		Pf1N1B4_4241	0.76	-0.3
4,700,210	+		Pf1N1B4_4241	0.76	+1.1
4,700,210	+		Pf1N1B4_4241	0.76	+0.2
4,700,211	-		Pf1N1B4_4241	0.76	+0.4
4,700,261	+		Pf1N1B4_4241	0.82	-0.7
4,700,262	-		Pf1N1B4_4241	0.82	-0.6
4,700,262	-		Pf1N1B4_4241	0.82	+2.5
4,700,367	-				-0.1
4,700,369	+				-0.0
4,700,369	+				-1.0
4,700,370	-				+0.9
4,700,375	+				+0.5
4,700,487	+				-0.5
4,700,487	+				-0.0
4,700,488	-				+2.2
4,700,546	+				-0.5
4,700,601	+				-1.2
4,700,889	-				-1.8
4,700,889	-		Pf1N1B4_4242	0.15	+0.8
4,700,889	-		Pf1N1B4_4242	0.15	-1.1
4,700,943	-		Pf1N1B4_4242	0.19	-0.6
4,700,946	+		Pf1N1B4_4242	0.19	+1.6
4,700,947	-		Pf1N1B4_4242	0.19	-1.3
4,700,947	-		Pf1N1B4_4242	0.19	+2.1
4,701,021	-		Pf1N1B4_4242	0.24	-0.6