Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3874

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,303,242	+		Pf1N1B4_3873	0.18	+1.6
4,303,242	+		Pf1N1B4_3873	0.18	+1.3
4,303,242	+		Pf1N1B4_3873	0.18	+0.2
4,303,242	+		Pf1N1B4_3873	0.18	-0.4
4,303,242	+		Pf1N1B4_3873	0.18	+1.1
4,303,242	+				-1.2
4,303,242	+		Pf1N1B4_3873	0.18	+0.6
4,303,242	+		Pf1N1B4_3873	0.18	-0.4
4,303,242	+		Pf1N1B4_3873	0.18	-0.7
4,303,242	+		Pf1N1B4_3873	0.18	+0.9
4,303,242	+		Pf1N1B4_3873	0.18	-1.4
4,303,242	+		Pf1N1B4_3873	0.18	-1.0
4,303,242	+		Pf1N1B4_3873	0.18	-0.7
4,303,242	+		Pf1N1B4_3873	0.18	+0.0
4,303,242	+		Pf1N1B4_3873	0.18	-1.0
4,303,242	+		Pf1N1B4_3873	0.18	+0.6
4,303,242	+		Pf1N1B4_3873	0.18	-2.2
4,303,242	+		Pf1N1B4_3873	0.18	-1.4
4,303,242	+				+0.0
4,303,243	-				+0.4
4,303,243	-		Pf1N1B4_3873	0.18	+1.1
4,303,243	-		Pf1N1B4_3873	0.18	-0.5
4,303,243	-		Pf1N1B4_3873	0.18	-0.8
4,303,243	-		Pf1N1B4_3873	0.18	-0.5
4,303,243	-		Pf1N1B4_3873	0.18	-0.8
4,303,243	-		Pf1N1B4_3873	0.18	-0.4
4,303,243	-		Pf1N1B4_3873	0.18	+2.2
4,303,243	-		Pf1N1B4_3873	0.18	+0.3
4,303,243	-		Pf1N1B4_3873	0.18	+0.4
4,303,243	-				+0.0
4,303,243	-		Pf1N1B4_3873	0.18	-0.7
4,303,243	-		Pf1N1B4_3873	0.18	-2.2
4,303,243	-		Pf1N1B4_3873	0.18	+0.2
4,303,243	-		Pf1N1B4_3873	0.18	-1.5
4,303,243	-		Pf1N1B4_3873	0.18	+1.9
4,303,243	-		Pf1N1B4_3873	0.18	+0.2
4,303,243	-		Pf1N1B4_3873	0.18	+0.8
4,303,284	+		Pf1N1B4_3873	0.21	+0.6
4,303,284	+		Pf1N1B4_3873	0.21	+0.0
4,303,284	+		Pf1N1B4_3873	0.21	-1.2
4,303,285	-		Pf1N1B4_3873	0.21	-0.2
4,303,285	-		Pf1N1B4_3873	0.21	+0.6
4,303,285	-		Pf1N1B4_3873	0.21	+0.6
4,303,285	-		Pf1N1B4_3873	0.21	-1.5
4,303,285	-		Pf1N1B4_3873	0.21	-0.8
4,303,320	+		Pf1N1B4_3873	0.24	-1.5
4,303,320	+		Pf1N1B4_3873	0.24	-2.8
4,303,321	-		Pf1N1B4_3873	0.24	-1.0
4,303,441	+		Pf1N1B4_3873	0.34	+0.0
4,303,479	+		Pf1N1B4_3873	0.37	+0.6
4,303,479	+		Pf1N1B4_3873	0.37	-0.7
4,303,479	+		Pf1N1B4_3873	0.37	+2.3
4,303,479	+		Pf1N1B4_3873	0.37	-0.7
4,303,479	+		Pf1N1B4_3873	0.37	-0.8
4,303,479	+		Pf1N1B4_3873	0.37	-2.1
4,303,479	+		Pf1N1B4_3873	0.37	-1.4
4,303,479	+				-0.7
4,303,479	+				-0.4
4,303,480	-		Pf1N1B4_3873	0.37	-0.4
4,303,480	-		Pf1N1B4_3873	0.37	-1.0
4,303,480	-				-1.2
4,303,653	+		Pf1N1B4_3873	0.51	-1.4
4,303,653	+		Pf1N1B4_3873	0.51	-1.5
4,303,653	+		Pf1N1B4_3873	0.51	+1.9
4,303,653	+		Pf1N1B4_3873	0.51	-1.8
4,303,653	+		Pf1N1B4_3873	0.51	-0.4
4,303,653	+		Pf1N1B4_3873	0.51	-0.7
4,303,653	+				-0.4
4,303,654	-		Pf1N1B4_3873	0.51	-0.4
4,303,654	-		Pf1N1B4_3873	0.51	-0.4
4,303,654	-		Pf1N1B4_3873	0.51	-0.1
4,303,654	-		Pf1N1B4_3873	0.51	+0.6
4,303,654	-		Pf1N1B4_3873	0.51	-2.3
4,303,654	-				-1.2
4,303,704	+		Pf1N1B4_3873	0.55	-1.2
4,303,756	-		Pf1N1B4_3873	0.59	-0.5
4,303,767	+		Pf1N1B4_3873	0.60	+0.6
4,303,767	+		Pf1N1B4_3873	0.60	-2.0
4,303,767	+		Pf1N1B4_3873	0.60	-1.8
4,303,767	+		Pf1N1B4_3873	0.60	+1.0
4,303,767	+		Pf1N1B4_3873	0.60	-0.7
4,303,767	+		Pf1N1B4_3873	0.60	-1.8
4,303,767	+				-2.3
4,303,767	+		Pf1N1B4_3873	0.60	-3.2
4,303,767	+		Pf1N1B4_3873	0.60	-0.2
4,303,767	+		Pf1N1B4_3873	0.60	-1.0
4,303,767	+		Pf1N1B4_3873	0.60	-2.3
4,303,767	+		Pf1N1B4_3873	0.60	+0.0
4,303,767	+				+0.0
4,303,767	+		Pf1N1B4_3873	0.60	-0.7
4,303,767	+		Pf1N1B4_3873	0.60	-1.7
4,303,767	+		Pf1N1B4_3873	0.60	-1.7
4,303,767	+		Pf1N1B4_3873	0.60	-1.2
4,303,767	+		Pf1N1B4_3873	0.60	-0.5
4,303,767	+		Pf1N1B4_3873	0.60	-0.4
4,303,767	+		Pf1N1B4_3873	0.60	+0.6
4,303,767	+		Pf1N1B4_3873	0.60	-0.4
4,303,767	+		Pf1N1B4_3873	0.60	+1.0
4,303,767	+		Pf1N1B4_3873	0.60	+0.0
4,303,767	+		Pf1N1B4_3873	0.60	-3.0
4,303,767	+		Pf1N1B4_3873	0.60	+0.2
4,303,767	+		Pf1N1B4_3873	0.60	+0.0
4,303,767	+		Pf1N1B4_3873	0.60	-1.4
4,303,767	+		Pf1N1B4_3873	0.60	-2.2
4,303,768	-		Pf1N1B4_3873	0.60	-2.0
4,303,768	-		Pf1N1B4_3873	0.60	-1.2
4,303,768	-		Pf1N1B4_3873	0.60	-0.7
4,303,768	-		Pf1N1B4_3873	0.60	-1.8
4,303,768	-		Pf1N1B4_3873	0.60	+1.2
4,303,768	-		Pf1N1B4_3873	0.60	+1.6
4,303,768	-		Pf1N1B4_3873	0.60	-1.4
4,303,768	-				-2.1
4,303,768	-		Pf1N1B4_3873	0.60	-0.5
4,303,768	-		Pf1N1B4_3873	0.60	+1.0
4,303,768	-		Pf1N1B4_3873	0.60	-0.9
4,303,768	-		Pf1N1B4_3873	0.60	-1.0
4,303,768	-		Pf1N1B4_3873	0.60	+1.2
4,303,806	+		Pf1N1B4_3873	0.63	+1.6
4,303,806	+		Pf1N1B4_3873	0.63	-1.4
4,303,807	-		Pf1N1B4_3873	0.63	-1.1
4,303,807	-		Pf1N1B4_3873	0.63	-2.0
4,303,839	+		Pf1N1B4_3873	0.66	-1.4
4,303,840	-		Pf1N1B4_3873	0.66	-1.9
4,303,840	-		Pf1N1B4_3873	0.66	-1.2
4,303,840	-		Pf1N1B4_3873	0.66	+1.6
4,303,840	-		Pf1N1B4_3873	0.66	+0.9
4,303,864	+		Pf1N1B4_3873	0.68	-1.2
4,303,865	-		Pf1N1B4_3873	0.68	-3.3
4,303,865	-		Pf1N1B4_3873	0.68	+0.7
4,303,869	-		Pf1N1B4_3873	0.68	-0.8
4,303,902	+		Pf1N1B4_3873	0.71	-0.4
4,303,902	+		Pf1N1B4_3873	0.71	+1.0
4,304,011	+		Pf1N1B4_3873	0.80	+0.3
4,304,011	+		Pf1N1B4_3873	0.80	+1.6
4,304,011	+		Pf1N1B4_3873	0.80	+1.3
4,304,086	+		Pf1N1B4_3873	0.86	+0.6
4,304,086	+		Pf1N1B4_3873	0.86	-1.0
4,304,086	+		Pf1N1B4_3873	0.86	-0.7
4,304,086	+		Pf1N1B4_3873	0.86	-1.2
4,304,086	+		Pf1N1B4_3873	0.86	-1.1
4,304,086	+		Pf1N1B4_3873	0.86	+0.3
4,304,086	+		Pf1N1B4_3873	0.86	+0.2
4,304,086	+				-0.7
4,304,086	+		Pf1N1B4_3873	0.86	+2.0
4,304,086	+		Pf1N1B4_3873	0.86	-1.6
4,304,087	-		Pf1N1B4_3873	0.86	-0.7
4,304,087	-		Pf1N1B4_3873	0.86	+0.4
4,304,087	-		Pf1N1B4_3873	0.86	-1.8
4,304,087	-		Pf1N1B4_3873	0.86	+1.4
4,304,087	-				+1.6
4,304,087	-		Pf1N1B4_3873	0.86	-0.7
4,304,087	-		Pf1N1B4_3873	0.86	+0.2
4,304,087	-		Pf1N1B4_3873	0.86	-0.0
4,304,089	-		Pf1N1B4_3873	0.86	+0.3
4,304,112	+				-1.8
4,304,112	+		Pf1N1B4_3873	0.88	-1.4
4,304,113	-		Pf1N1B4_3873	0.88	+0.4
4,304,113	-		Pf1N1B4_3873	0.88	+0.8
4,304,212	+				+2.8
4,304,213	-				-0.3
4,304,213	-				-0.4
4,304,277	+		Pf1N1B4_3874	0.29	-0.7
4,304,277	+		Pf1N1B4_3874	0.29	-0.8
4,304,277	+		Pf1N1B4_3874	0.29	+1.2
4,304,277	+		Pf1N1B4_3874	0.29	-0.5
4,304,278	-		Pf1N1B4_3874	0.29	+0.0
4,304,278	-		Pf1N1B4_3874	0.29	-2.1
4,304,278	-		Pf1N1B4_3874	0.29	+0.0
4,304,347	+		Pf1N1B4_3874	0.60	-0.4
4,304,347	+		Pf1N1B4_3874	0.60	+0.0
4,304,347	+		Pf1N1B4_3874	0.60	-1.4
4,304,348	-		Pf1N1B4_3874	0.60	-1.5
4,304,348	-		Pf1N1B4_3874	0.60	-1.0
4,304,348	-		Pf1N1B4_3874	0.60	+0.0
4,304,348	-				+0.0
4,304,348	-		Pf1N1B4_3874	0.60	-2.0
4,304,348	-		Pf1N1B4_3874	0.60	+0.0
4,304,368	+		Pf1N1B4_3874	0.69	+1.2
4,304,369	-		Pf1N1B4_3874	0.69	-0.1
4,304,477	+				-0.4
4,304,477	+				+0.8
4,304,477	+				+0.0
4,304,477	+				-1.6
4,304,477	+				-2.5
4,304,477	+				-1.5
4,304,477	+				+0.0
4,304,523	+				-2.2
4,304,523	+				-2.4
4,304,537	+				-0.4
4,304,537	+				-1.0
4,304,537	+				-0.8
4,304,538	-				+0.2
4,304,538	-				+1.3
4,304,589	+				+0.0
4,304,628	+				-0.2
4,304,628	+				-2.0
4,304,629	-				+1.6
4,304,820	+				-3.2
4,304,820	+				-0.7
4,304,820	+				-1.8
4,304,820	+				+0.0
4,304,820	+				-0.4
4,304,821	-				+1.6
4,304,821	-				-0.4
4,304,821	-				+1.0
4,304,821	-				-2.3
4,304,821	-				+0.6
4,304,854	-				-0.1
4,304,854	-				-0.9
4,304,940	+				-1.8
4,304,940	+				+0.4
4,304,963	+				+0.2
4,304,963	+				+0.6
4,304,984	+				-0.1
4,305,132	-				+1.0
4,305,132	-				+1.6
4,305,200	-				-2.2
4,305,220	+				+0.6
4,305,365	+				+0.5
4,305,369	+				-1.8
4,305,419	+				-0.1