Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3841

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,257,180	+				-1.0
4,257,180	+				-3.1
4,257,181	-				-1.5
4,257,261	+				-0.4
4,257,399	-				-0.8
4,257,421	+				+0.6
4,257,434	+				-1.8
4,257,435	-				-0.8
4,257,667	+				-0.7
4,257,668	-		Pf1N1B4_3840	0.16	-1.1
4,257,668	-		Pf1N1B4_3840	0.16	+0.8
4,257,856	+		Pf1N1B4_3840	0.49	-1.1
4,257,856	+		Pf1N1B4_3840	0.49	+0.0
4,257,856	+		Pf1N1B4_3840	0.49	-1.0
4,257,856	+		Pf1N1B4_3840	0.49	-0.2
4,257,856	+		Pf1N1B4_3840	0.49	-0.6
4,257,856	+		Pf1N1B4_3840	0.49	+1.8
4,257,857	-		Pf1N1B4_3840	0.49	+0.4
4,257,857	-		Pf1N1B4_3840	0.49	-1.0
4,257,857	-		Pf1N1B4_3840	0.49	+0.2
4,257,857	-		Pf1N1B4_3840	0.49	-0.8
4,257,857	-		Pf1N1B4_3840	0.49	-1.6
4,257,857	-				+0.2
4,257,857	-		Pf1N1B4_3840	0.49	-1.1
4,258,142	+				-1.3
4,258,151	+				+1.6
4,258,152	-				+0.0
4,258,152	-				-1.6
4,258,341	+		Pf1N1B4_3841	0.14	-1.0
4,258,341	+				-0.4
4,258,341	+		Pf1N1B4_3841	0.14	+1.4
4,258,341	+		Pf1N1B4_3841	0.14	+0.3
4,258,341	+		Pf1N1B4_3841	0.14	-1.2
4,258,373	-		Pf1N1B4_3841	0.17	+0.6
4,258,442	-		Pf1N1B4_3841	0.23	+0.5
4,258,442	-		Pf1N1B4_3841	0.23	+0.3
4,258,757	+		Pf1N1B4_3841	0.49	+1.4
4,258,918	+		Pf1N1B4_3841	0.62	+0.0
4,258,918	+		Pf1N1B4_3841	0.62	-0.2
4,258,918	+		Pf1N1B4_3841	0.62	+1.2
4,258,918	+		Pf1N1B4_3841	0.62	+2.0
4,258,918	+		Pf1N1B4_3841	0.62	+0.5
4,258,919	-		Pf1N1B4_3841	0.62	+0.6
4,258,919	-		Pf1N1B4_3841	0.62	+0.7
4,259,237	-		Pf1N1B4_3841	0.88	+1.8
4,259,268	+				-0.1
4,259,268	+				-3.4
4,259,511	+				-0.2
4,259,511	+				+0.6
4,259,512	-				-0.3
4,259,512	-				-0.3
4,259,612	+				+0.0
4,259,612	+				+0.6
4,259,613	-				+1.6