Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3607

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,017,209	+				+0.8
4,017,264	+				+0.8
4,017,264	+				+0.4
4,017,264	+				+0.2
4,017,264	+				-0.3
4,017,264	+				+0.7
4,017,265	-				-2.5
4,017,265	-				+0.4
4,017,265	-				+0.4
4,017,265	-				+0.4
4,017,265	-				+1.8
4,017,273	+				+0.9
4,017,274	-				-1.1
4,017,274	-				+1.5
4,017,274	-				-1.6
4,017,274	-				-0.4
4,017,484	+		Pf1N1B4_3606	0.26	-0.6
4,017,484	+		Pf1N1B4_3606	0.26	+0.9
4,017,484	+		Pf1N1B4_3606	0.26	+0.1
4,017,485	-		Pf1N1B4_3606	0.26	+0.0
4,017,485	-				-0.1
4,017,784	+		Pf1N1B4_3606	0.63	-0.5
4,017,784	+		Pf1N1B4_3606	0.63	-0.1
4,017,784	+		Pf1N1B4_3606	0.63	-0.2
4,017,784	+		Pf1N1B4_3606	0.63	+0.4
4,017,785	-		Pf1N1B4_3606	0.63	+0.1
4,017,785	-		Pf1N1B4_3606	0.63	+0.7
4,017,785	-		Pf1N1B4_3606	0.63	+0.2
4,017,785	-		Pf1N1B4_3606	0.63	-1.3
4,017,785	-		Pf1N1B4_3606	0.63	+1.7
4,017,785	-		Pf1N1B4_3606	0.63	-0.1
4,017,785	-		Pf1N1B4_3606	0.63	-1.1
4,017,785	-		Pf1N1B4_3606	0.63	-0.6
4,017,785	-		Pf1N1B4_3606	0.63	-1.1
4,017,785	-		Pf1N1B4_3606	0.63	-0.1
4,018,042	-				-1.1
4,018,115	+				+1.6
4,018,250	+		Pf1N1B4_3607	0.13	+1.1
4,018,251	-		Pf1N1B4_3607	0.13	+0.3
4,018,805	+				-0.9
4,018,805	+		Pf1N1B4_3607	0.54	+0.3
4,018,806	-		Pf1N1B4_3607	0.54	+0.0
4,018,826	+		Pf1N1B4_3607	0.55	+2.6
4,018,827	-		Pf1N1B4_3607	0.55	-0.1
4,019,035	-		Pf1N1B4_3607	0.71	-2.2
4,019,231	+		Pf1N1B4_3607	0.85	-0.1
4,019,231	+		Pf1N1B4_3607	0.85	-0.8
4,019,279	+		Pf1N1B4_3607	0.89	+0.6
4,019,279	+		Pf1N1B4_3607	0.89	+0.4
4,019,280	-		Pf1N1B4_3607	0.89	+1.9
4,019,280	-		Pf1N1B4_3607	0.89	+0.1
4,019,342	+				-0.5
4,019,342	+				-1.7
4,019,342	+				+0.3
4,019,342	+				-1.1
4,019,343	-				+1.8
4,019,343	-				-0.1
4,019,343	-				+0.7
4,019,343	-				+0.3
4,019,343	-				-0.8
4,019,343	-				-1.4
4,019,343	-				-0.7
4,019,343	-				+2.6
4,019,589	-		Pf1N1B4_3608	0.34	-0.8
4,019,719	+		Pf1N1B4_3608	0.62	-0.7
4,019,720	-		Pf1N1B4_3608	0.63	-0.5
4,019,882	+				+0.4
4,019,934	-				+2.7
4,019,980	-				-1.1
4,020,066	+				-2.1
4,020,066	+				-1.4
4,020,066	+				-1.5
4,020,067	-				-0.1
4,020,067	-				+0.0
4,020,067	-				-2.9
4,020,072	+				+0.9
4,020,072	+				+0.1
4,020,072	+				+1.5
4,020,073	-				-0.3
4,020,073	-				+0.5
4,020,073	-				-0.9
4,020,073	-				+0.6
4,020,073	-				-0.5
4,020,125	+				-2.1
4,020,126	-				-1.5
4,020,126	-				+2.5
4,020,126	-				+0.2
4,020,126	-				-1.0
4,020,126	-				+0.5
4,020,205	+		Pf1N1B4_3609	0.32	-1.8
4,020,206	-		Pf1N1B4_3609	0.33	-1.8
4,020,206	-		Pf1N1B4_3609	0.33	-0.5
4,020,206	-		Pf1N1B4_3609	0.33	-0.3
4,020,262	+		Pf1N1B4_3609	0.51	-0.4
4,020,262	+		Pf1N1B4_3609	0.51	-0.4
4,020,263	-		Pf1N1B4_3609	0.51	-0.4
4,020,263	-		Pf1N1B4_3609	0.51	+0.1
4,020,263	-		Pf1N1B4_3609	0.51	-0.4
4,020,263	-		Pf1N1B4_3609	0.51	+0.5