Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3153

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,531,808	+				-0.4
3,531,808	+				-1.2
3,531,905	-				+0.6
3,531,905	-				-0.0
3,531,928	+		Pf1N1B4_3152	0.13	+1.6
3,531,928	+		Pf1N1B4_3152	0.13	+1.3
3,531,928	+		Pf1N1B4_3152	0.13	+1.3
3,531,928	+		Pf1N1B4_3152	0.13	+0.5
3,531,928	+		Pf1N1B4_3152	0.13	-0.7
3,531,929	-		Pf1N1B4_3152	0.13	+0.4
3,531,929	-		Pf1N1B4_3152	0.13	-1.8
3,532,300	-		Pf1N1B4_3152	0.53	-1.4
3,532,319	-		Pf1N1B4_3152	0.55	-1.9
3,532,424	-		Pf1N1B4_3152	0.67	-0.7
3,532,424	-		Pf1N1B4_3152	0.67	-0.9
3,532,424	-		Pf1N1B4_3152	0.67	-2.2
3,532,424	-		Pf1N1B4_3152	0.67	-1.4
3,532,424	-		Pf1N1B4_3152	0.67	-0.0
3,532,424	-		Pf1N1B4_3152	0.67	+0.2
3,532,424	-		Pf1N1B4_3152	0.67	-1.6
3,532,424	-		Pf1N1B4_3152	0.67	-0.0
3,532,424	-		Pf1N1B4_3152	0.67	-0.2
3,532,424	-		Pf1N1B4_3152	0.67	-2.2
3,532,431	+		Pf1N1B4_3152	0.67	+0.6
3,532,704	+				-1.0
3,532,724	+				-0.5
3,532,724	+				+0.8
3,532,724	+				-1.8
3,532,779	+				+0.6
3,532,794	+		Pf1N1B4_3153	0.19	+0.6
3,532,794	+		Pf1N1B4_3153	0.19	+1.6
3,532,794	+		Pf1N1B4_3153	0.19	+1.8
3,532,794	+				+2.1
3,532,794	+		Pf1N1B4_3153	0.19	+1.1
3,532,794	+		Pf1N1B4_3153	0.19	+0.1
3,532,794	+				-0.0
3,532,794	+		Pf1N1B4_3153	0.19	-0.2
3,533,632	+				-0.4
3,533,632	+				-1.4
3,533,632	+				+0.9
3,533,632	+				-2.5
3,533,632	+				+1.0
3,533,632	+				-2.0
3,533,632	+				-1.2
3,533,632	+				-0.4
3,533,633	-				+1.6
3,533,633	-				+0.6
3,533,633	-				-0.2
3,533,633	-				+0.3
3,533,633	-				+0.6
3,533,734	+				-0.8
3,533,735	-				+0.6
3,533,735	-				-2.1
3,533,802	+				-1.2
3,533,802	+				+0.2
3,533,802	+				-0.8
3,533,802	+				+0.2
3,533,802	+				-0.0
3,533,802	+				-0.4
3,533,803	-				-0.1
3,533,803	-				+0.6
3,533,803	-				-0.0
3,533,803	-				-1.0
3,533,803	-				-1.0
3,533,831	-		Pf1N1B4_3155	0.14	-2.1
3,533,847	-		Pf1N1B4_3155	0.16	-0.6
3,533,847	-		Pf1N1B4_3155	0.16	+1.6