Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2917

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,274,490	-		Pf1N1B4_2917	0.11	+2.2
3,274,490	-		Pf1N1B4_2917	0.11	-1.3
3,274,490	-		Pf1N1B4_2917	0.11	+1.0
3,274,637	-		Pf1N1B4_2917	0.19	+0.4
3,274,751	-		Pf1N1B4_2917	0.26	+1.5
3,274,751	-		Pf1N1B4_2917	0.26	+2.4
3,274,751	-		Pf1N1B4_2917	0.26	+1.8
3,274,751	-				+2.8
3,274,751	-		Pf1N1B4_2917	0.26	+1.8
3,274,751	-		Pf1N1B4_2917	0.26	+4.5
3,274,751	-		Pf1N1B4_2917	0.26	+1.3
3,274,751	-				+1.6
3,274,751	-		Pf1N1B4_2917	0.26	+4.6
3,274,751	-		Pf1N1B4_2917	0.26	+1.5
3,274,751	-		Pf1N1B4_2917	0.26	+1.8
3,274,751	-		Pf1N1B4_2917	0.26	-2.9
3,274,856	-		Pf1N1B4_2917	0.32	+1.2
3,274,856	-		Pf1N1B4_2917	0.32	+0.4
3,274,856	-		Pf1N1B4_2917	0.32	+1.5
3,274,856	-		Pf1N1B4_2917	0.32	+0.8
3,274,856	-		Pf1N1B4_2917	0.32	+2.1
3,274,856	-		Pf1N1B4_2917	0.32	+1.6
3,274,856	-				+1.9
3,274,856	-		Pf1N1B4_2917	0.32	+2.2
3,274,973	-		Pf1N1B4_2917	0.39	+1.6
3,274,973	-		Pf1N1B4_2917	0.39	+0.2
3,275,028	-		Pf1N1B4_2917	0.42	-0.0
3,275,028	-		Pf1N1B4_2917	0.42	+2.5
3,275,105	-		Pf1N1B4_2917	0.46	+2.0
3,275,159	-		Pf1N1B4_2917	0.50	+2.0
3,275,183	-		Pf1N1B4_2917	0.51	+1.1
3,275,183	-		Pf1N1B4_2917	0.51	+1.5
3,275,226	-		Pf1N1B4_2917	0.53	+2.2
3,275,255	-		Pf1N1B4_2917	0.55	+4.9
3,275,255	-		Pf1N1B4_2917	0.55	-1.7
3,275,612	-		Pf1N1B4_2917	0.76	+1.7
3,275,612	-		Pf1N1B4_2917	0.76	+1.5
3,275,612	-		Pf1N1B4_2917	0.76	+1.6
3,275,612	-		Pf1N1B4_2917	0.76	+1.9
3,275,612	-		Pf1N1B4_2917	0.76	+3.4
3,275,612	-		Pf1N1B4_2917	0.76	+1.2
3,275,612	-		Pf1N1B4_2917	0.76	+1.5
3,275,612	-		Pf1N1B4_2917	0.76	-0.4
3,275,612	-		Pf1N1B4_2917	0.76	+1.6
3,275,612	-		Pf1N1B4_2917	0.76	+0.4
3,275,612	-		Pf1N1B4_2917	0.76	+0.3
3,275,612	-		Pf1N1B4_2917	0.76	+2.6
3,275,612	-		Pf1N1B4_2917	0.76	+1.7
3,275,790	-		Pf1N1B4_2917	0.86	+2.3
3,275,810	-		Pf1N1B4_2917	0.87	+0.7
3,275,810	-		Pf1N1B4_2917	0.87	+2.7
3,275,810	-		Pf1N1B4_2917	0.87	+0.8
3,275,810	-		Pf1N1B4_2917	0.87	+1.3
3,275,810	-		Pf1N1B4_2917	0.87	+1.9
3,275,810	-		Pf1N1B4_2917	0.87	+2.8
3,275,810	-		Pf1N1B4_2917	0.87	+0.6
3,275,810	-		Pf1N1B4_2917	0.87	+1.4
3,275,810	-		Pf1N1B4_2917	0.87	+1.8
3,275,810	-		Pf1N1B4_2917	0.87	-0.5
3,275,810	-		Pf1N1B4_2917	0.87	+0.8
3,275,810	-		Pf1N1B4_2917	0.87	+2.9
3,275,810	-		Pf1N1B4_2917	0.87	+1.9
3,275,810	-		Pf1N1B4_2917	0.87	+0.8
3,275,810	-		Pf1N1B4_2917	0.87	+3.0
3,275,810	-		Pf1N1B4_2917	0.87	+2.9
3,275,810	-		Pf1N1B4_2917	0.87	+1.6
3,275,900	-				+2.1
3,276,024	-				+2.1
3,276,024	-				+3.0
3,276,024	-				+1.6
3,276,024	-				+0.8
3,276,024	-				+2.1
3,276,024	-				+4.2
3,276,024	-				-0.0
3,276,024	-				+1.3
3,276,024	-				+1.1
3,276,024	-				+1.9
3,276,024	-				-1.4
3,276,024	-				+1.0
3,276,024	-				+1.9
3,276,024	-				+1.3
3,276,024	-				+4.4
3,276,024	-				+0.3
3,276,024	-				+2.2
3,276,024	-				-0.4
3,276,024	-				+0.3
3,276,024	-				+1.0
3,276,024	-				+0.1
3,276,024	-				+1.3
3,276,024	-				+1.8
3,276,024	-				-1.2
3,276,024	-				+0.4
3,276,024	-				+1.4
3,276,024	-				-0.1
3,276,024	-				+0.8
3,276,024	-				+2.3
3,276,024	-				+0.6
3,276,030	-				+0.1
3,276,030	-				+4.1
3,276,032	-				-2.3
3,276,032	-				-0.7
3,276,032	-				+0.4
3,276,090	+				+0.9
3,276,090	+				-1.2
3,276,090	+				+0.3
3,276,091	-				+1.6
3,276,190	+				+1.8
3,276,190	+				-0.6
3,276,190	+				+0.6
3,276,190	+				-0.7
3,276,191	-				+2.6
3,276,191	-				-1.7
3,276,191	-				-0.3
3,276,191	-				-0.9
3,276,434	+		Pf1N1B4_2918	0.13	+1.4