Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2476

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,806,554	+				-0.9
2,806,669	+				-1.0
2,806,669	+				-0.2
2,806,670	-				-1.1
2,806,851	+				+0.2
2,806,851	+				-1.3
2,806,851	+				-0.1
2,806,915	+				+0.5
2,806,916	-				-0.5
2,807,121	+		Pf1N1B4_2475	0.38	+0.2
2,807,122	-		Pf1N1B4_2475	0.38	+0.5
2,807,395	+		Pf1N1B4_2475	0.77	-0.1
2,807,429	+		Pf1N1B4_2475	0.82	-0.5
2,807,557	+				-0.7
2,807,557	+				-0.1
2,807,557	+				-2.4
2,807,558	-				-1.8
2,807,558	-				-1.1
2,807,558	-				+0.9
2,807,692	+				-0.5
2,807,693	-				-0.4
2,807,693	-				+1.0
2,807,732	+				-0.1
2,808,064	+		Pf1N1B4_2476	0.26	+0.6
2,808,080	+		Pf1N1B4_2476	0.27	-0.5
2,808,080	+		Pf1N1B4_2476	0.27	+0.8
2,808,080	+		Pf1N1B4_2476	0.27	-1.3
2,808,080	+		Pf1N1B4_2476	0.27	-0.3
2,808,081	-		Pf1N1B4_2476	0.27	-0.1
2,808,081	-		Pf1N1B4_2476	0.27	-0.5
2,808,081	-		Pf1N1B4_2476	0.27	+0.0
2,808,081	-				+2.0
2,808,081	-		Pf1N1B4_2476	0.27	-1.7
2,808,081	-		Pf1N1B4_2476	0.27	+1.1
2,808,081	-		Pf1N1B4_2476	0.27	+0.7
2,808,567	+		Pf1N1B4_2476	0.52	-1.4
2,808,568	-		Pf1N1B4_2476	0.52	+0.1
2,808,568	-		Pf1N1B4_2476	0.52	+1.4
2,808,568	-		Pf1N1B4_2476	0.52	-1.8
2,808,568	-		Pf1N1B4_2476	0.52	+0.1
2,808,728	+		Pf1N1B4_2476	0.60	-2.2
2,808,729	-		Pf1N1B4_2476	0.61	+0.5
2,808,802	+		Pf1N1B4_2476	0.64	-0.6
2,808,803	-		Pf1N1B4_2476	0.64	-0.1
2,808,803	-		Pf1N1B4_2476	0.64	-0.5
2,808,803	-		Pf1N1B4_2476	0.64	+1.8
2,808,803	-		Pf1N1B4_2476	0.64	+0.8
2,808,803	-		Pf1N1B4_2476	0.64	+2.2
2,808,901	+		Pf1N1B4_2476	0.69	-1.7
2,808,902	-		Pf1N1B4_2476	0.69	+0.6
2,809,104	+		Pf1N1B4_2476	0.80	+2.2
2,809,104	+		Pf1N1B4_2476	0.80	+1.8
2,809,114	+				+0.5
2,809,125	+		Pf1N1B4_2476	0.81	+0.1
2,809,125	+		Pf1N1B4_2476	0.81	+0.7
2,809,126	-		Pf1N1B4_2476	0.81	+3.8
2,809,280	+		Pf1N1B4_2476	0.89	+1.2
2,809,280	+		Pf1N1B4_2476	0.89	+0.5
2,809,281	-		Pf1N1B4_2476	0.89	-1.7
2,809,281	-		Pf1N1B4_2476	0.89	-0.6
2,809,281	-		Pf1N1B4_2476	0.89	+1.5
2,809,334	+				+0.3
2,809,335	-				-0.5
2,809,335	-				-0.3
2,809,335	-				+0.5
2,809,364	+				+0.3
2,809,411	+				+4.1
2,809,412	-				-1.7
2,809,412	-				-0.8
2,809,412	-				-0.7
2,809,489	-				-2.1
2,809,587	+				+0.5
2,809,587	+				-0.7
2,809,587	+				+1.3
2,809,587	+				-0.1
2,809,587	+				+0.6
2,809,587	+				-1.1
2,809,587	+				+0.4
2,809,587	+				+2.1
2,809,588	-				+1.5
2,809,588	-				-1.3
2,809,588	-				-1.8
2,809,588	-				-1.3
2,809,588	-				+0.1
2,809,593	+				+0.7
2,809,593	+				+1.8
2,809,593	+				+1.5
2,809,594	-				+0.3
2,809,594	-				-0.1
2,809,594	-				-0.4
2,809,594	-				-1.8
2,809,594	-				-1.6
2,809,594	-				-1.1
2,809,594	-				+1.2
2,809,594	-				+0.5
2,809,594	-				-0.8
2,809,597	+				-0.1
2,809,598	-				-0.8
2,809,598	-				+0.8
2,809,598	-				-2.8
2,809,619	-				-2.4
2,809,656	+				-1.7
2,809,656	+				+0.6
2,809,657	-				+0.4
2,809,657	-				+0.0
2,809,775	+				-1.8
2,809,775	+				-1.5
2,809,776	-				-1.6
2,809,954	+		Pf1N1B4_2477	0.43	-2.3
2,809,954	+		Pf1N1B4_2477	0.43	-1.3
2,809,954	+		Pf1N1B4_2477	0.43	-1.4
2,809,954	+		Pf1N1B4_2477	0.43	-1.3
2,810,128	+		Pf1N1B4_2477	0.81	+0.9
2,810,128	+		Pf1N1B4_2477	0.81	-1.1
2,810,128	+		Pf1N1B4_2477	0.81	-0.8
2,810,129	-		Pf1N1B4_2477	0.81	-1.5
2,810,385	-				-1.7