Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1853

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,123,917	+		Pf1N1B4_1851	0.18	+0.2
2,123,918	-		Pf1N1B4_1851	0.18	+0.3
2,124,080	+		Pf1N1B4_1851	0.43	+0.1
2,124,080	+		Pf1N1B4_1851	0.43	-0.4
2,124,080	+				-0.0
2,124,080	+		Pf1N1B4_1851	0.43	+0.2
2,124,081	-		Pf1N1B4_1851	0.43	-0.9
2,124,081	-		Pf1N1B4_1851	0.43	-2.4
2,124,119	+		Pf1N1B4_1851	0.49	+0.1
2,124,119	+		Pf1N1B4_1851	0.49	+0.3
2,124,120	-		Pf1N1B4_1851	0.49	+0.8
2,124,120	-		Pf1N1B4_1851	0.49	-1.4
2,124,283	+		Pf1N1B4_1851	0.74	-0.3
2,124,283	+		Pf1N1B4_1851	0.74	+1.6
2,124,283	+		Pf1N1B4_1851	0.74	-0.0
2,124,283	+		Pf1N1B4_1851	0.74	+0.1
2,124,283	+		Pf1N1B4_1851	0.74	-0.2
2,124,283	+		Pf1N1B4_1851	0.74	-0.8
2,124,283	+		Pf1N1B4_1851	0.74	-0.0
2,124,284	-		Pf1N1B4_1851	0.74	-1.5
2,124,284	-		Pf1N1B4_1851	0.74	-2.0
2,124,284	-		Pf1N1B4_1851	0.74	+1.0
2,124,284	-		Pf1N1B4_1851	0.74	-0.3
2,124,285	+		Pf1N1B4_1851	0.74	+0.4
2,124,287	+		Pf1N1B4_1851	0.74	+0.6
2,124,287	+		Pf1N1B4_1851	0.74	-0.9
2,124,287	+		Pf1N1B4_1851	0.74	-1.1
2,124,287	+		Pf1N1B4_1851	0.74	-2.0
2,124,288	-		Pf1N1B4_1851	0.75	+1.6
2,124,288	-		Pf1N1B4_1851	0.75	-1.2
2,124,288	-		Pf1N1B4_1851	0.75	-2.5
2,124,288	-		Pf1N1B4_1851	0.75	-0.0
2,124,288	-		Pf1N1B4_1851	0.75	+1.0
2,124,288	-		Pf1N1B4_1851	0.75	-0.3
2,124,385	+		Pf1N1B4_1851	0.89	-2.3
2,124,386	-		Pf1N1B4_1851	0.90	-0.0
2,124,482	+				-1.6
2,124,483	-				+0.8
2,124,483	-				+1.2
2,124,493	+				-0.8
2,124,493	+				-1.3
2,124,493	+				+0.3
2,124,493	+				-1.4
2,124,493	+				-1.2
2,124,494	-				+0.6
2,124,494	-				+2.1
2,124,494	-				+1.7
2,124,494	-				+1.1
2,124,494	-				+2.6
2,124,494	-				+2.4
2,124,494	-				+1.1
2,124,494	-				+2.8
2,124,494	-				+1.0
2,124,494	-				+0.3
2,124,494	-				+2.4
2,124,498	+				-1.3
2,124,498	+				-0.1
2,124,498	+				+0.1
2,124,498	+				-1.5
2,124,498	+				+2.3
2,124,498	+				+0.6
2,124,498	+				-0.4
2,124,498	+				-1.2
2,124,499	-				+1.3
2,124,499	-				+1.2
2,124,499	-				+0.5
2,124,499	-				+0.7
2,124,499	-				+2.8
2,124,499	-				-1.4
2,124,499	-				+0.2
2,124,499	-				+1.3
2,124,499	-				+2.8
2,124,499	-				+0.9
2,124,499	-				+1.6
2,124,499	-				+1.2
2,124,499	-				+0.7
2,124,499	-				+0.6
2,124,499	-				+3.2
2,124,507	+				+1.1
2,124,507	+				-2.1
2,124,508	-				+0.1
2,124,508	-				+3.4
2,124,520	-				+1.2
2,124,540	-				+2.9
2,124,564	+				-0.0
2,124,643	+				+1.6
2,124,643	+				-0.6
2,124,643	+				-1.6
2,124,643	+				-0.4
2,124,643	+				-0.0
2,124,643	+				-2.6
2,124,644	-				+1.4
2,124,644	-				+2.9
2,124,644	-				+2.6
2,124,644	-				+1.6
2,124,644	-				+3.1
2,124,644	-				+0.3
2,124,644	-				+1.2
2,124,644	-				+0.6
2,124,677	+				+1.3
2,124,677	+				+1.6
2,124,677	+				-0.4
2,124,677	+				-1.3
2,124,678	-				+0.8
2,124,678	-				+1.6
2,124,678	-				+1.7
2,124,678	-				+2.1
2,124,678	-				+2.1
2,124,679	+				-1.0
2,124,679	+				+1.1
2,124,680	-				+1.6
2,124,699	+				-0.0
2,124,699	+				-0.3
2,124,699	+				+0.1
2,124,700	-				+1.0
2,124,700	-				+2.3
2,124,721	+				-0.4
2,124,721	+				-0.8
2,124,722	-				+0.7
2,124,722	-				+3.1
2,124,722	-				+3.1
2,124,722	-				+1.2
2,124,722	-				+1.2
2,124,752	-				+1.5
2,124,752	-				-0.1
2,124,752	-				+0.7
2,124,797	+				+1.5
2,124,798	-				+0.6
2,124,798	-				+3.2
2,124,807	+				-0.5
2,124,807	+				-1.6
2,124,807	+				-0.8
2,124,807	+				-0.2
2,124,807	+				-1.6
2,124,807	+				-2.2
2,124,807	+				+0.3
2,124,807	+				-2.2
2,124,807	+				-2.2
2,124,807	+				-0.5
2,124,807	+				-0.2
2,124,807	+				-1.6
2,124,807	+				-1.7
2,124,807	+				+1.8
2,124,807	+				-1.6
2,124,807	+				+1.5
2,124,807	+				-0.0
2,124,807	+				+0.3
2,124,808	-				+1.5
2,124,808	-				+1.4
2,124,808	-				-0.9
2,124,808	-				+4.0
2,124,808	-				+0.7
2,124,808	-				+2.5
2,124,808	-				+2.1
2,124,808	-				+1.4
2,124,808	-				+0.7
2,124,808	-				-0.0
2,124,808	-				+0.5
2,124,808	-				+0.9
2,124,808	-				+0.5
2,124,808	-				+0.3
2,124,808	-				+2.6
2,124,808	-				-0.0
2,124,809	+				+0.4
2,124,809	+				+0.3
2,124,905	-				+0.2
2,124,905	-				+0.6
2,124,939	+				+2.0
2,124,940	-				-0.5
2,124,976	-				+0.2
2,125,036	+		Pf1N1B4_1853	0.13	-0.0
2,125,073	-		Pf1N1B4_1853	0.16	+1.5
2,125,158	-		Pf1N1B4_1853	0.24	+1.3
2,125,158	-		Pf1N1B4_1853	0.24	-0.1
2,125,158	-		Pf1N1B4_1853	0.24	+2.9
2,125,158	-		Pf1N1B4_1853	0.24	+0.4
2,125,217	+		Pf1N1B4_1853	0.30	-1.0
2,125,218	-		Pf1N1B4_1853	0.30	-1.3
2,125,218	-		Pf1N1B4_1853	0.30	+0.8
2,125,218	-		Pf1N1B4_1853	0.30	+1.0
2,125,223	+		Pf1N1B4_1853	0.30	-1.0
2,125,223	+		Pf1N1B4_1853	0.30	+2.0
2,125,223	+		Pf1N1B4_1853	0.30	-0.0
2,125,224	-		Pf1N1B4_1853	0.30	+2.0
2,125,224	-		Pf1N1B4_1853	0.30	+0.5
2,125,224	-		Pf1N1B4_1853	0.30	+3.4
2,125,224	-		Pf1N1B4_1853	0.30	-1.2
2,125,224	-		Pf1N1B4_1853	0.30	-1.0
2,125,224	-		Pf1N1B4_1853	0.30	-0.2
2,125,224	-		Pf1N1B4_1853	0.30	+0.1
2,125,224	-		Pf1N1B4_1853	0.30	+0.5
2,125,224	-		Pf1N1B4_1853	0.30	+1.2
2,125,224	-		Pf1N1B4_1853	0.30	+0.0
2,125,224	-		Pf1N1B4_1853	0.30	-0.7
2,125,307	+		Pf1N1B4_1853	0.38	+0.8
2,125,307	+		Pf1N1B4_1853	0.38	-0.9
2,125,308	-		Pf1N1B4_1853	0.38	+1.5
2,125,308	-		Pf1N1B4_1853	0.38	+1.5
2,125,308	-		Pf1N1B4_1853	0.38	+1.0
2,125,308	-		Pf1N1B4_1853	0.38	+1.3
2,125,308	-		Pf1N1B4_1853	0.38	-0.1
2,125,308	-		Pf1N1B4_1853	0.38	-1.2
2,125,308	-		Pf1N1B4_1853	0.38	+1.0
2,125,481	+		Pf1N1B4_1853	0.55	-1.5
2,125,481	+		Pf1N1B4_1853	0.55	-0.7
2,125,481	+		Pf1N1B4_1853	0.55	+0.5
2,125,481	+		Pf1N1B4_1853	0.55	-0.5
2,125,482	-		Pf1N1B4_1853	0.55	-0.4
2,125,482	-		Pf1N1B4_1853	0.55	+1.0
2,125,482	-		Pf1N1B4_1853	0.55	+1.3
2,125,482	-		Pf1N1B4_1853	0.55	+1.3
2,125,482	-		Pf1N1B4_1853	0.55	+1.1
2,125,667	+		Pf1N1B4_1853	0.73	-0.3
2,125,667	+		Pf1N1B4_1853	0.73	+1.2
2,125,667	+		Pf1N1B4_1853	0.73	-2.0
2,125,668	-		Pf1N1B4_1853	0.73	+0.5
2,125,865	+				+0.5
2,125,865	+				-1.9
2,125,865	+				-1.4
2,125,866	-				-0.8
2,125,866	-				+1.2
2,125,866	-				-2.4
2,125,874	-				-0.8
2,125,913	-				-1.3
2,125,959	+				-0.7
2,125,959	+				+0.8
2,125,960	-				+0.0
2,125,960	-				-0.7
2,125,960	-				+0.5
2,126,044	+				+2.1
2,126,148	+				-0.9
2,126,148	+				+2.2
2,126,148	+				+2.1
2,126,149	-				-0.2
2,126,149	-				-0.9
2,126,149	-				+0.3
2,126,149	-				-0.6
2,126,149	-				+0.8
2,126,149	-				-0.0
2,126,149	-				-1.5
2,126,317	+		Pf1N1B4_1854	0.18	-0.6
2,126,318	-		Pf1N1B4_1854	0.18	+0.5
2,126,318	-		Pf1N1B4_1854	0.18	+0.7
2,126,318	-		Pf1N1B4_1854	0.18	-1.2
2,126,422	+		Pf1N1B4_1854	0.24	+0.3
2,126,422	+		Pf1N1B4_1854	0.24	+1.3
2,126,429	-		Pf1N1B4_1854	0.25	+1.5
2,126,430	-		Pf1N1B4_1854	0.25	+0.1
2,126,478	+		Pf1N1B4_1854	0.28	-0.0
2,126,479	-		Pf1N1B4_1854	0.28	+0.3
2,126,499	+		Pf1N1B4_1854	0.29	+0.9
2,126,499	+		Pf1N1B4_1854	0.29	-0.5
2,126,500	-		Pf1N1B4_1854	0.29	+2.3
2,126,500	-		Pf1N1B4_1854	0.29	-0.6
2,126,500	-		Pf1N1B4_1854	0.29	-0.8
2,126,817	+		Pf1N1B4_1854	0.49	+1.0
2,126,817	+		Pf1N1B4_1854	0.49	+1.5
2,126,817	+		Pf1N1B4_1854	0.49	+0.1
2,126,817	+		Pf1N1B4_1854	0.49	+0.1
2,126,817	+		Pf1N1B4_1854	0.49	+0.2
2,126,817	+				+1.1
2,126,817	+		Pf1N1B4_1854	0.49	+1.2
2,126,817	+		Pf1N1B4_1854	0.49	-1.9
2,126,817	+		Pf1N1B4_1854	0.49	+0.3
2,126,817	+		Pf1N1B4_1854	0.49	-0.5
2,126,817	+		Pf1N1B4_1854	0.49	-0.3
2,126,817	+		Pf1N1B4_1854	0.49	+0.1
2,126,817	+		Pf1N1B4_1854	0.49	-2.5
2,126,817	+		Pf1N1B4_1854	0.49	-1.0
2,126,818	-		Pf1N1B4_1854	0.49	-1.6
2,126,818	-		Pf1N1B4_1854	0.49	-2.0
2,126,818	-		Pf1N1B4_1854	0.49	-1.6
2,126,818	-		Pf1N1B4_1854	0.49	-0.9
2,126,818	-		Pf1N1B4_1854	0.49	-0.0
2,126,818	-		Pf1N1B4_1854	0.49	+1.5
2,126,818	-		Pf1N1B4_1854	0.49	+0.8
2,126,818	-		Pf1N1B4_1854	0.49	-0.7
2,126,818	-		Pf1N1B4_1854	0.49	+4.0
2,126,818	-		Pf1N1B4_1854	0.49	-2.7
2,126,818	-		Pf1N1B4_1854	0.49	-1.3
2,126,818	-		Pf1N1B4_1854	0.49	+0.3
2,126,818	-		Pf1N1B4_1854	0.49	+1.2
2,126,818	-		Pf1N1B4_1854	0.49	+1.5
2,126,818	-		Pf1N1B4_1854	0.49	-1.3
2,126,892	+		Pf1N1B4_1854	0.54	-1.0
2,126,907	+		Pf1N1B4_1854	0.55	+0.1
2,126,907	+		Pf1N1B4_1854	0.55	-0.5
2,126,908	-		Pf1N1B4_1854	0.55	+1.0
2,126,908	-		Pf1N1B4_1854	0.55	-0.0
2,126,908	-		Pf1N1B4_1854	0.55	-2.5
2,126,921	+		Pf1N1B4_1854	0.56	+0.8
2,126,922	-		Pf1N1B4_1854	0.56	-0.0
2,126,922	-		Pf1N1B4_1854	0.56	+0.8