Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1762

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,014,446	+		Pf1N1B4_1761	0.34	+1.8
2,014,446	+		Pf1N1B4_1761	0.34	+0.1
2,014,620	+		Pf1N1B4_1761	0.49	-0.7
2,014,620	+		Pf1N1B4_1761	0.49	+0.9
2,014,620	+		Pf1N1B4_1761	0.49	+1.5
2,014,621	-		Pf1N1B4_1761	0.50	-0.3
2,014,629	+		Pf1N1B4_1761	0.50	+0.2
2,014,629	+		Pf1N1B4_1761	0.50	+1.5
2,014,716	+		Pf1N1B4_1761	0.58	-0.5
2,014,716	+		Pf1N1B4_1761	0.58	-0.2
2,014,716	+		Pf1N1B4_1761	0.58	+0.3
2,014,716	+		Pf1N1B4_1761	0.58	+2.1
2,014,716	+		Pf1N1B4_1761	0.58	+1.5
2,014,716	+				-0.8
2,014,717	-		Pf1N1B4_1761	0.58	+0.5
2,014,717	-		Pf1N1B4_1761	0.58	-1.3
2,014,717	-		Pf1N1B4_1761	0.58	-0.1
2,014,717	-		Pf1N1B4_1761	0.58	+2.7
2,014,717	-		Pf1N1B4_1761	0.58	-1.1
2,014,717	-		Pf1N1B4_1761	0.58	+0.7
2,014,717	-		Pf1N1B4_1761	0.58	-1.1
2,014,797	+		Pf1N1B4_1761	0.65	-2.1
2,014,954	+		Pf1N1B4_1761	0.80	-1.3
2,014,954	+		Pf1N1B4_1761	0.80	+1.5
2,014,955	-		Pf1N1B4_1761	0.80	-0.3
2,014,955	-		Pf1N1B4_1761	0.80	+1.1
2,014,955	-		Pf1N1B4_1761	0.80	-1.9
2,014,955	-		Pf1N1B4_1761	0.80	-0.8
2,015,253	+				-0.8
2,015,254	-				-0.5
2,015,310	-				-1.3
2,015,376	+		Pf1N1B4_1762	0.17	-1.7
2,015,376	+		Pf1N1B4_1762	0.17	-1.3
2,015,376	+		Pf1N1B4_1762	0.17	-1.4
2,015,424	-		Pf1N1B4_1762	0.23	-0.3
2,015,558	+		Pf1N1B4_1762	0.39	-1.0
2,015,559	-		Pf1N1B4_1762	0.39	+0.8
2,015,559	-		Pf1N1B4_1762	0.39	-1.3
2,015,559	-		Pf1N1B4_1762	0.39	-0.1
2,015,629	-		Pf1N1B4_1762	0.47	+0.5
2,015,630	+		Pf1N1B4_1762	0.47	-0.1
2,015,630	+		Pf1N1B4_1762	0.47	+1.5
2,015,631	-		Pf1N1B4_1762	0.47	+0.2
2,015,631	-		Pf1N1B4_1762	0.47	+0.5
2,015,631	-		Pf1N1B4_1762	0.47	+0.7
2,015,631	-		Pf1N1B4_1762	0.47	-1.3
2,015,631	-		Pf1N1B4_1762	0.47	-0.9
2,016,045	+				+1.0
2,016,045	+				+1.0
2,016,078	+				+0.0
2,016,078	+				+1.3
2,016,078	+				+0.3
2,016,078	+				-0.1
2,016,078	+				+0.8
2,016,078	+				-1.1
2,016,078	+				+1.4
2,016,078	+				+0.2
2,016,078	+				-1.6
2,016,078	+				-1.1
2,016,079	-				-1.1
2,016,079	-				+0.5
2,016,079	-				-1.5
2,016,079	-				+1.5
2,016,079	-				-1.3
2,016,090	+				-0.2
2,016,090	+				-1.3
2,016,091	-				-2.3
2,016,091	-				-0.1
2,016,101	+				+0.7
2,016,101	+				+1.0
2,016,102	-				-1.5
2,016,102	-				-0.6
2,016,139	-				+0.5
2,016,152	+				-0.1
2,016,177	+				+1.5
2,016,177	+				+0.5
2,016,178	-				-1.8
2,016,178	-				-0.1
2,016,178	-				+0.7
2,016,178	-				+0.1
2,016,204	-				-0.3
2,016,223	-				-1.8
2,016,234	+				-1.1
2,016,234	+				-1.1
2,016,234	+				-1.9
2,016,234	+				-0.8
2,016,234	+				-0.2
2,016,234	+				+0.1
2,016,234	+				-0.3
2,016,234	+				-2.6
2,016,234	+				+1.3
2,016,234	+				-1.9
2,016,234	+				+0.8
2,016,234	+				-0.1
2,016,234	+				+0.4
2,016,234	+				-0.1
2,016,235	-				-1.3
2,016,235	-				+1.2
2,016,235	-				-0.7
2,016,235	-				+0.2
2,016,235	-				-1.6
2,016,235	-				-1.3
2,016,381	+		Pf1N1B4_1763	0.10	-0.4
2,016,381	+		Pf1N1B4_1763	0.10	-0.8
2,016,381	+		Pf1N1B4_1763	0.10	-1.1
2,016,382	-		Pf1N1B4_1763	0.10	+0.6
2,016,382	-		Pf1N1B4_1763	0.10	-0.7
2,016,415	-		Pf1N1B4_1763	0.12	+0.1
2,016,459	+		Pf1N1B4_1763	0.15	-0.5
2,016,459	+		Pf1N1B4_1763	0.15	-1.9
2,016,460	-		Pf1N1B4_1763	0.15	-0.1
2,016,460	-		Pf1N1B4_1763	0.15	-0.4
2,016,489	+		Pf1N1B4_1763	0.17	+1.2
2,016,489	+		Pf1N1B4_1763	0.17	+0.8
2,016,489	+		Pf1N1B4_1763	0.17	+2.9
2,016,489	+		Pf1N1B4_1763	0.17	+1.5
2,016,489	+				+0.9
2,016,489	+		Pf1N1B4_1763	0.17	-1.9
2,016,489	+		Pf1N1B4_1763	0.17	-1.5
2,016,489	+		Pf1N1B4_1763	0.17	+0.2
2,016,489	+		Pf1N1B4_1763	0.17	+2.9
2,016,489	+		Pf1N1B4_1763	0.17	+0.2
2,016,490	-		Pf1N1B4_1763	0.17	-0.5
2,016,490	-		Pf1N1B4_1763	0.17	+0.4
2,016,490	-		Pf1N1B4_1763	0.17	-2.4
2,016,490	-		Pf1N1B4_1763	0.17	+1.6
2,016,490	-		Pf1N1B4_1763	0.17	+0.9
2,016,490	-		Pf1N1B4_1763	0.17	-0.1
2,016,490	-		Pf1N1B4_1763	0.17	-0.1
2,016,490	-		Pf1N1B4_1763	0.17	+0.5
2,016,492	+		Pf1N1B4_1763	0.17	+0.5
2,016,492	+		Pf1N1B4_1763	0.17	-0.1
2,016,492	+		Pf1N1B4_1763	0.17	-0.6
2,016,492	+		Pf1N1B4_1763	0.17	+0.9
2,016,493	-		Pf1N1B4_1763	0.17	-0.9
2,016,493	-		Pf1N1B4_1763	0.17	-0.1
2,016,493	-		Pf1N1B4_1763	0.17	+0.5
2,016,493	-		Pf1N1B4_1763	0.17	+0.8
2,016,498	+		Pf1N1B4_1763	0.18	+0.5
2,016,498	+		Pf1N1B4_1763	0.18	-0.9
2,016,498	+		Pf1N1B4_1763	0.18	-0.5
2,016,498	+		Pf1N1B4_1763	0.18	-0.5
2,016,498	+		Pf1N1B4_1763	0.18	-1.4
2,016,498	+		Pf1N1B4_1763	0.18	-0.2
2,016,498	+		Pf1N1B4_1763	0.18	+0.3
2,016,498	+		Pf1N1B4_1763	0.18	-0.8
2,016,498	+				-0.1
2,016,498	+		Pf1N1B4_1763	0.18	+1.3
2,016,498	+		Pf1N1B4_1763	0.18	-1.6
2,016,498	+		Pf1N1B4_1763	0.18	-2.6
2,016,498	+		Pf1N1B4_1763	0.18	+1.5
2,016,499	-		Pf1N1B4_1763	0.18	-0.3
2,016,499	-		Pf1N1B4_1763	0.18	-1.6
2,016,499	-		Pf1N1B4_1763	0.18	-2.2
2,016,499	-		Pf1N1B4_1763	0.18	-0.1
2,016,499	-		Pf1N1B4_1763	0.18	-2.4
2,016,499	-		Pf1N1B4_1763	0.18	-0.8
2,016,499	-		Pf1N1B4_1763	0.18	+1.0
2,016,499	-		Pf1N1B4_1763	0.18	+0.4
2,016,499	-		Pf1N1B4_1763	0.18	+1.2
2,016,499	-		Pf1N1B4_1763	0.18	+1.1
2,016,499	-				-0.1
2,016,564	+		Pf1N1B4_1763	0.22	-0.7
2,016,564	+		Pf1N1B4_1763	0.22	-0.4
2,016,564	+		Pf1N1B4_1763	0.22	+0.5
2,016,564	+		Pf1N1B4_1763	0.22	+0.9
2,016,564	+		Pf1N1B4_1763	0.22	-0.6
2,016,564	+		Pf1N1B4_1763	0.22	+0.9
2,016,564	+		Pf1N1B4_1763	0.22	+0.5
2,016,564	+		Pf1N1B4_1763	0.22	-0.8
2,016,565	-		Pf1N1B4_1763	0.22	-1.5
2,016,565	-		Pf1N1B4_1763	0.22	+1.9
2,016,668	+		Pf1N1B4_1763	0.29	+1.5
2,016,668	+		Pf1N1B4_1763	0.29	+3.0
2,016,685	-		Pf1N1B4_1763	0.30	+3.1
2,016,732	+		Pf1N1B4_1763	0.33	+2.1
2,016,744	+		Pf1N1B4_1763	0.33	+1.5
2,016,745	-				+1.5
2,016,785	+		Pf1N1B4_1763	0.36	+0.5
2,016,786	-		Pf1N1B4_1763	0.36	-2.4
2,016,786	-		Pf1N1B4_1763	0.36	+0.7
2,016,901	+		Pf1N1B4_1763	0.43	-0.5
2,017,062	+		Pf1N1B4_1763	0.54	-1.3
2,017,062	+		Pf1N1B4_1763	0.54	-1.1
2,017,062	+		Pf1N1B4_1763	0.54	-0.8
2,017,063	-		Pf1N1B4_1763	0.54	+0.5
2,017,063	-		Pf1N1B4_1763	0.54	+0.5
2,017,063	-		Pf1N1B4_1763	0.54	+2.5