Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1760

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,009,310	+		Pf1N1B4_1759	0.60	+0.3
2,009,310	+		Pf1N1B4_1759	0.60	+0.5
2,009,310	+		Pf1N1B4_1759	0.60	+0.2
2,009,310	+		Pf1N1B4_1759	0.60	+0.3
2,009,311	-		Pf1N1B4_1759	0.60	-0.0
2,009,346	+		Pf1N1B4_1759	0.62	-2.5
2,009,346	+		Pf1N1B4_1759	0.62	-1.6
2,009,346	+		Pf1N1B4_1759	0.62	-0.3
2,009,347	-		Pf1N1B4_1759	0.62	+0.1
2,009,347	-				+0.5
2,009,347	-		Pf1N1B4_1759	0.62	-0.4
2,009,347	-		Pf1N1B4_1759	0.62	-1.6
2,009,396	+		Pf1N1B4_1759	0.64	-0.5
2,009,396	+		Pf1N1B4_1759	0.64	-0.5
2,009,396	+		Pf1N1B4_1759	0.64	-0.5
2,009,396	+				-0.1
2,009,400	+		Pf1N1B4_1759	0.64	+0.9
2,009,400	+		Pf1N1B4_1759	0.64	+1.5
2,009,401	-		Pf1N1B4_1759	0.64	-0.3
2,009,665	+		Pf1N1B4_1759	0.75	-2.2
2,009,665	+		Pf1N1B4_1759	0.75	-0.2
2,009,665	+		Pf1N1B4_1759	0.75	+1.5
2,009,665	+		Pf1N1B4_1759	0.75	+2.5
2,009,666	-		Pf1N1B4_1759	0.75	-1.3
2,009,666	-		Pf1N1B4_1759	0.75	-0.5
2,009,702	+		Pf1N1B4_1759	0.77	-0.9
2,009,702	+		Pf1N1B4_1759	0.77	+2.0
2,009,702	+		Pf1N1B4_1759	0.77	+1.1
2,009,702	+		Pf1N1B4_1759	0.77	-0.6
2,009,702	+		Pf1N1B4_1759	0.77	+0.7
2,009,702	+		Pf1N1B4_1759	0.77	+0.1
2,009,702	+		Pf1N1B4_1759	0.77	-0.6
2,009,703	-		Pf1N1B4_1759	0.77	+0.7
2,009,703	-		Pf1N1B4_1759	0.77	-0.1
2,009,703	-		Pf1N1B4_1759	0.77	+0.8
2,009,703	-		Pf1N1B4_1759	0.77	-3.0
2,009,703	-		Pf1N1B4_1759	0.77	+0.9
2,009,703	-		Pf1N1B4_1759	0.77	+0.5
2,009,703	-		Pf1N1B4_1759	0.77	-0.5
2,009,703	-		Pf1N1B4_1759	0.77	-0.7
2,009,703	-		Pf1N1B4_1759	0.77	-0.8
2,009,703	-		Pf1N1B4_1759	0.77	-0.1
2,010,008	+		Pf1N1B4_1759	0.90	-1.0
2,010,009	-		Pf1N1B4_1759	0.90	-0.1
2,010,012	+		Pf1N1B4_1759	0.90	+1.2
2,010,078	+				-1.5
2,010,198	+				+3.5
2,010,199	-				-1.1
2,010,617	-		Pf1N1B4_1760	0.10	-2.6
2,010,617	-		Pf1N1B4_1760	0.10	+0.9
2,010,617	-		Pf1N1B4_1760	0.10	-0.1
2,010,617	-		Pf1N1B4_1760	0.10	-0.1
2,010,923	-				+0.9
2,010,923	-		Pf1N1B4_1760	0.18	+0.7
2,011,228	+		Pf1N1B4_1760	0.26	+0.3
2,011,228	+		Pf1N1B4_1760	0.26	+0.5
2,011,538	-		Pf1N1B4_1760	0.34	+0.5
2,011,844	-		Pf1N1B4_1760	0.42	-0.9
2,011,844	-		Pf1N1B4_1760	0.42	-0.1
2,012,149	+		Pf1N1B4_1760	0.50	-0.5
2,012,149	+		Pf1N1B4_1760	0.50	+0.7
2,012,150	-		Pf1N1B4_1760	0.50	+0.9
2,012,150	-		Pf1N1B4_1760	0.50	-0.4
2,012,150	-		Pf1N1B4_1760	0.50	+1.6
2,012,150	-		Pf1N1B4_1760	0.50	-0.1
2,012,150	-		Pf1N1B4_1760	0.50	+0.4
2,012,277	-		Pf1N1B4_1760	0.53	+0.7
2,012,277	-		Pf1N1B4_1760	0.53	+0.4
2,012,456	-		Pf1N1B4_1760	0.58	-0.3
2,012,460	-		Pf1N1B4_1760	0.58	+0.5
2,012,460	-		Pf1N1B4_1760	0.58	-0.4
2,012,761	+		Pf1N1B4_1760	0.66	+0.5
2,012,761	+		Pf1N1B4_1760	0.66	-0.4
2,012,762	-		Pf1N1B4_1760	0.66	+1.4
2,012,762	-		Pf1N1B4_1760	0.66	-0.8
2,012,762	-		Pf1N1B4_1760	0.66	-0.1
2,012,762	-		Pf1N1B4_1760	0.66	-1.6
2,012,762	-		Pf1N1B4_1760	0.66	+0.1
2,012,762	-		Pf1N1B4_1760	0.66	-0.3
2,012,765	+		Pf1N1B4_1760	0.66	-1.1
2,013,067	+		Pf1N1B4_1760	0.74	-0.6
2,013,067	+		Pf1N1B4_1760	0.74	+0.6
2,013,067	+		Pf1N1B4_1760	0.74	+0.1
2,013,068	-		Pf1N1B4_1760	0.74	-0.1
2,013,068	-		Pf1N1B4_1760	0.74	-1.1
2,013,068	-		Pf1N1B4_1760	0.74	-0.8
2,013,161	+		Pf1N1B4_1760	0.76	+0.8
2,013,287	+		Pf1N1B4_1760	0.79	-0.8
2,013,287	+		Pf1N1B4_1760	0.79	-2.2
2,013,327	-		Pf1N1B4_1760	0.80	-0.7
2,013,341	+		Pf1N1B4_1760	0.81	-1.1
2,013,341	+		Pf1N1B4_1760	0.81	-1.6
2,013,342	-		Pf1N1B4_1760	0.81	+1.5
2,013,342	-		Pf1N1B4_1760	0.81	-0.1
2,013,342	-		Pf1N1B4_1760	0.81	+0.4
2,013,379	-		Pf1N1B4_1760	0.82	-0.3
2,013,394	+		Pf1N1B4_1760	0.82	-2.9
2,013,394	+		Pf1N1B4_1760	0.82	-0.5
2,013,394	+		Pf1N1B4_1760	0.82	+0.4
2,013,395	-		Pf1N1B4_1760	0.82	-0.3
2,013,395	-		Pf1N1B4_1760	0.82	+0.2
2,013,395	-		Pf1N1B4_1760	0.82	-0.8
2,013,395	-		Pf1N1B4_1760	0.82	+1.2
2,013,395	-		Pf1N1B4_1760	0.82	+1.4
2,013,676	+		Pf1N1B4_1760	0.90	-1.1
2,013,676	+		Pf1N1B4_1760	0.90	+1.3
2,013,676	+		Pf1N1B4_1760	0.90	-0.5
2,013,677	-		Pf1N1B4_1760	0.90	+0.2
2,013,797	-				+2.3
2,013,869	-				+1.5
2,013,869	-				-0.1
2,014,446	+		Pf1N1B4_1761	0.34	+1.8
2,014,446	+		Pf1N1B4_1761	0.34	+0.1
2,014,620	+		Pf1N1B4_1761	0.49	-0.7
2,014,620	+		Pf1N1B4_1761	0.49	+0.9
2,014,620	+		Pf1N1B4_1761	0.49	+1.5
2,014,621	-		Pf1N1B4_1761	0.50	-0.3
2,014,629	+		Pf1N1B4_1761	0.50	+0.2
2,014,629	+		Pf1N1B4_1761	0.50	+1.5
2,014,716	+		Pf1N1B4_1761	0.58	-0.5
2,014,716	+		Pf1N1B4_1761	0.58	-0.2
2,014,716	+		Pf1N1B4_1761	0.58	+0.3
2,014,716	+		Pf1N1B4_1761	0.58	+2.1
2,014,716	+		Pf1N1B4_1761	0.58	+1.5
2,014,716	+				-0.8
2,014,717	-		Pf1N1B4_1761	0.58	+0.5
2,014,717	-		Pf1N1B4_1761	0.58	-1.3
2,014,717	-		Pf1N1B4_1761	0.58	-0.1
2,014,717	-		Pf1N1B4_1761	0.58	+2.7
2,014,717	-		Pf1N1B4_1761	0.58	-1.1
2,014,717	-		Pf1N1B4_1761	0.58	+0.7
2,014,717	-		Pf1N1B4_1761	0.58	-1.1
2,014,797	+		Pf1N1B4_1761	0.65	-2.1
2,014,954	+		Pf1N1B4_1761	0.80	-1.3
2,014,954	+		Pf1N1B4_1761	0.80	+1.5
2,014,955	-		Pf1N1B4_1761	0.80	-0.3
2,014,955	-		Pf1N1B4_1761	0.80	+1.1
2,014,955	-		Pf1N1B4_1761	0.80	-1.9
2,014,955	-		Pf1N1B4_1761	0.80	-0.8